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The novel allele (3R) of the VNTR polymorphism in the XRCC5 promoter region dramatically decreases the gene expression

Authors :
Mehrdad Rajaei
Mostafa Saadat
Iraj Saadat
Source :
Biochemical and Biophysical Research Communications. 430:640-641
Publication Year :
2013
Publisher :
Elsevier BV, 2013.

Abstract

Polymorphism of variable number of tandem repeats (VNTR) in the promoter region of X-ray repair cross-complementing 5 (MIM: 194364, XRCC5 ; rs6147172) was reported. The aim of the present study is to evaluate the influence of this polymorphism on XRCC5 mRNA levels. Genotypes of XRCC5 VNTR were determined by high resolution of melting analysis (HRMA). The quantitative XRCC5 mRNA expression (compared to s-actin expression) among 0R/1R, 1R/2R, and 1R/3R genotypes was investigated. There was a negative correlation between the overall number of tandem repeats and XRCC5 expression ( r = −0.965, df = 7, P XRCC5 decreased as function of number of tandem repeats. The 3R allele of the VNTR polymorphism in the XRCC5 promoter region dramatically decreases the gene expression.

Details

ISSN :
0006291X
Volume :
430
Database :
OpenAIRE
Journal :
Biochemical and Biophysical Research Communications
Accession number :
edsair.doi.dedup.....5ebbfa25d27bc9cd9899f2945f41a9c1
Full Text :
https://doi.org/10.1016/j.bbrc.2012.11.099