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Crystal structure of the Epithiospecifier Protein, ESP from Arabidopsis thaliana provides insights into its product specificity
- Source :
- Biochemical and biophysical research communications. 478(2)
- Publication Year :
- 2016
-
Abstract
- Specifier proteins are important components of the glucosinolate-myrosinase system, which mediate plant defense against herbivory and pathogen attacks. Upon tissue disruption, glucosinolates are hydrolyzed to instable aglucones by myrosinases, and then aglucones will rearrange to form defensive isothiocyanates. Specifier proteins can redirect this reaction to form other products, such as simple nitriles, epithionitriles and organic thiocyanates instead of isothiocyanates based on the side chain structure of glucosinolate and the type of the specifier proteins. Nevertheless, the molecular mechanism underlying the different product spectrums of various specifier proteins was not fully understood. Here in this study, we solved the crystal structure of the Epithiospecifier Protein, ESP from Arabidopsis thaliana (AtESP) at 2.3 A resolution. Structural comparisons with the previously solved structure of thiocyanate forming protein, TFP from Thlaspi arvense (TaTFP) reveal that AtESP shows a dimerization pattern different from TaTFP. Moreover, AtESP harbors a slightly larger active site pocket than TaTFP and several residues around the active site are different between the two proteins, which might account for the different product spectrums of the two proteins. Together, our structural study provides important insights into the molecular mechanisms of specifier proteins and shed light on the basis of their different product spectrums.
- Subjects :
- 0106 biological sciences
0301 basic medicine
Stereochemistry
Protein domain
Amino Acid Motifs
Glucosinolates
Biophysics
Arabidopsis
Gene Expression
Crystallography, X-Ray
01 natural sciences
Biochemistry
Protein Structure, Secondary
Substrate Specificity
03 medical and health sciences
chemistry.chemical_compound
Protein Domains
Isothiocyanates
Catalytic Domain
Nitriles
Plant defense against herbivory
Escherichia coli
Arabidopsis thaliana
Cloning, Molecular
Molecular Biology
Thiocyanate
biology
Arabidopsis Proteins
Hydrolysis
Active site
Cell Biology
biology.organism_classification
Recombinant Proteins
Enzymes
030104 developmental biology
chemistry
Plant protein
Glucosinolate
biology.protein
Biocatalysis
Thiocyanates
010606 plant biology & botany
Subjects
Details
- ISSN :
- 10902104
- Volume :
- 478
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Biochemical and biophysical research communications
- Accession number :
- edsair.doi.dedup.....5d1eb7a0e7e14e6851d68594bc1b40b3