Additional file 9: Figure S6. of Measure transcript integrity using RNA-seq data

Smoothed scatter plots showing correlation between TIN score and transcript size. (a)-(c) three samples with RIN value of 10; (d)-(e), two samples with RIN value of 8; (f)-(h) three samples with RIN value of 6; (i)-(k) three samples with RIN value of 4; (l) one sample with RIN value of 2. Blue, orange and red represents low, median and high density of data points, respectively. Transcripts with no read coverage or smaller then 100 nucleotide were removed. r, Pearson correlation coefficient. Linear regression lines fitted to data are indicated as black dashed lines. (PDF 6875 kb)