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Complete genome sequence of Crassaminicella sp. 143-21,isolated from a deep-sea hydrothermal vent

Authors :
Long-Fei Wu
Huan-Huan Zhang
Jun Xu
Ze-Xi Jiao
Xiao-Qing Qi
Wei-Jia Zhang
Xue-Gong Li
Institute of Deep-Sea Science and Engineering [Chinese Academy of Sciences] [Sanya] (IDSSE)
Chinese Academy of Sciences [Beijing] (CAS)
Shanghai Jiao Tong University [Shanghai]
Shangaï Jiao Tong University [Shangaï]
Laboratoire de chimie bactérienne (LCB)
Aix Marseille Université (AMU)-Centre National de la Recherche Scientifique (CNRS)
Aix Marseille Université (AMU)
International Associated Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms ( LIA-MagMC)
Chinese Academy of Sciences [Beijing] (CAS)-Centre National de la Recherche Scientifique (CNRS)
Source :
Marine Genomics, Marine Genomics, Elsevier, 2021, pp.100899. ⟨10.1016/j.margen.2021.100899⟩, Marine Genomics, 2021, pp.100899. ⟨10.1016/j.margen.2021.100899⟩
Publication Year :
2021
Publisher :
HAL CCSD, 2021.

Abstract

International audience; Crassaminicella sp. 143-21, a putative new species isolated from deep-sea hydrothermal vent chimney on the Central Indian Ridge (CIR), is an anaerobic, thermophilic and rod-shaped bacterium belonging to the family Clostridiaceae. In this study, we present the complete genome sequence of strain 143-21, comprising 2,756,133 bp with a G + C content of 31.1%. In total, 2427 protein coding genes, 121 tRNA genes and 33 rRNA genes were obtained. Genomic analysis of strain 143-21 revealed that numerous genes related to organic matter transport and catabolism, including peptide transport, amino acid transport, saccharide transport, ethanolamine transport and corresponding metabolic pathways. Further, the genome contains a large proportion of genes involved in translation, ribosomal structure, and signal transduction. These genes might facilitate microbial survival in deep-sea hydrothermal vent environment. The genome of strain 143-21 will be helpful for further understanding its adaptive strategies in the deep-sea hydrothermal vent environment.

Details

Language :
English
ISSN :
18747787
Database :
OpenAIRE
Journal :
Marine Genomics, Marine Genomics, Elsevier, 2021, pp.100899. ⟨10.1016/j.margen.2021.100899⟩, Marine Genomics, 2021, pp.100899. ⟨10.1016/j.margen.2021.100899⟩
Accession number :
edsair.doi.dedup.....5cf0aa502c01b372a0f7e11fc1f73536