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Two-dimensional IR spectroscopy reveals a hidden Fermi resonance band in the azido stretch spectrum of β-azidoalanine
- Source :
- Physical chemistry chemical physics : PCCP. 22(34)
- Publication Year :
- 2020
-
Abstract
- Azido stretch modes in a variety of azido-derivatized nonnatural amino acids and nucleotides have been used as a site-specific infrared (IR) probe for monitoring changes in their conformations and local electrostatic environments. The vibrational bands of azide probes are often accompanied by complex line shapes with shoulder peaks, which may arise either from incomplete background subtraction, Fermi resonance, or multiple conformers. The isotope substitution in the infrared probe has thus been introduced to remove Fermi resonances without causing a significant perturbation to the structure. Here, we synthesized and labeled the mid-N atoms of aliphatic azide derivatives with 15N to study the effects of isotope labelling on their vibrational properties. The FT-IR spectra of the aliphatic azide with asymmetric lineshape became a single symmetric band upon isotope substitution, which might be an indication of the removal of the hidden Fermi resonance from the system. We also noticed that the 2D-IR spectrum of unlabeled aliphatic azide has cross-peaks, even though it is not apparently identifiable. The 1D slice spectra obtained from the 2D-IR spectra reveal the existence of a hidden Fermi resonance peak. Furthermore, we show that this weak Fermi resonance does not produce discernible oscillatory beating patterns in the IR pump-probe spectrum, which has been used as evidence of the Fermi resonance. Therefore, we confirm that isotope labelling combined with 2D-IR spectroscopy is the most efficient and incisive way to identify the origin of small shoulder peaks in the linear and nonlinear vibrational spectra of various IR probe molecules.
- Subjects :
- Azides
Materials science
Infrared
Static Electricity
Molecular Conformation
General Physics and Astronomy
Infrared spectroscopy
02 engineering and technology
010402 general chemistry
01 natural sciences
Molecular physics
Vibration
Spectral line
chemistry.chemical_compound
Spectroscopy, Fourier Transform Infrared
Molecule
Physical and Theoretical Chemistry
Spectroscopy
Conformational isomerism
Astrophysics::Galaxy Astrophysics
Alanine
Nitrogen Isotopes
021001 nanoscience & nanotechnology
0104 chemical sciences
chemistry
Models, Chemical
Isotope Labeling
Fermi resonance
Azide
0210 nano-technology
Subjects
Details
- ISSN :
- 14639084
- Volume :
- 22
- Issue :
- 34
- Database :
- OpenAIRE
- Journal :
- Physical chemistry chemical physics : PCCP
- Accession number :
- edsair.doi.dedup.....5c6bc83f952fb113fc5e7f7c69da694f