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Mechanism Underlying the Role of LuxR Family Transcriptional Regulator abaR in Biofilm Formation by Acinetobacter baumannii
- Source :
- Current Microbiology
- Publication Year :
- 2021
- Publisher :
- Springer Science and Business Media LLC, 2021.
-
Abstract
- Our study attempted to explore the mechanism underlying the role of LuxR family transcriptional regulator abaR in biofilm formation by Acinetobacter baumannii. The abaR gene was knocked out in ATCC 17978 strain using homologous recombination method. The growth curve and biofilm formation were measured in the wild type and abaR gene knockdown strains. Transcriptome sequencing was performed in the wild type and abaR gene knockdown strains following 8 h of culture. The growth curve in the abaR gene knockdown strain was similar to that of the wild-type strain. Biofilm formation significantly declined in the abaR gene knockdown strain at 8 and 48 h after culture. A total of 137 differentially expressed genes (DEGs) were obtained including 20 downregulated DEGs and 117 upregulated DEGs. Genes with differential expression were closely related to viral procapsid maturation (GO:0046797), acetoin catabolism (GO:0045150), carbon metabolism (ko01200), and the glycolysis/gluconeogenesis (ko00010)-related pathways. The results of the eight verified expression DEGs were consistent with the results predicted by bioinformatics. AbaR gene knockdown significantly affected biofilm formation by A. baumannii ATCC 17978 strain. The glycolysis/gluconeogenesis pathways were significantly dysregulated and induced by abaR gene knockdown in A. baumannii. Supplementary Information The online version contains supplementary material available at 10.1007/s00284-021-02654-y.
- Subjects :
- Acinetobacter baumannii
Gene knockdown
biology
Biofilm
Wild type
General Medicine
biochemical phenomena, metabolism, and nutrition
biology.organism_classification
Applied Microbiology and Biotechnology
Microbiology
Viral procapsid maturation
Article
Cell biology
Repressor Proteins
Biofilms
Trans-Activators
Transcriptional regulation
Homologous recombination
Gene
Subjects
Details
- ISSN :
- 14320991 and 03438651
- Volume :
- 78
- Database :
- OpenAIRE
- Journal :
- Current Microbiology
- Accession number :
- edsair.doi.dedup.....5a5e34f7d12692d4735a8fda489599a7
- Full Text :
- https://doi.org/10.1007/s00284-021-02654-y