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Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms
- Source :
- ISME Journal, ISME Journal, Nature Publishing Group, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩, The ISME Journal, Europe PubMed Central, ISME Journal, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩
- Publication Year :
- 2016
- Publisher :
- HAL CCSD, 2016.
-
Abstract
- International audience; Bolidomonas is a genus of picoplanktonic flagellated algae that is closely related to diatoms. Triparma laevis, a species belonging to the Parmales, which are small cells with a siliceous covering, has been shown to form a monophyletic group with Bolidomonas. We isolated several novel strains of Bolidophyceae that have permitted further exploration of the diversity of this group using nuclear, plastidial and mitochondrial genes. The resulting phylogenetic data led us to formally emend the taxonomy of this group to include the Parmales within the Bolidophyceae, to combine Bolidomonas within Triparma and to define a novel species, Triparma eleuthera sp. nov. The global distribution of Bolidophyceae was then assessed using environmental sequences available in public databases, as well as a large 18S rRNA V9 metabarcode data set from the Tara Oceans expedition. Bolidophyceans appear ubiquitous throughout the sampled oceans but always constitute a minor component of the phytoplankton community, corresponding to at most ~ 4% of the metabarcodes from photosynthetic groups (excluding dinoflagellates). They are ~ 10 times more abundant in the small size fraction (0.8– 5 μm) than in larger size fractions. T. eleuthera sp. nov. constitutes the most abundant and most widespread operational taxonomic unit (OTU) followed by T. pacifica, T. mediterranea and the T. laevis clade. The T. mediterranea OTU is characteristic of Mediterranean Sea surface waters and the T. laevis clade OTU is most prevalent in colder waters, in particular off Antarctica.
- Subjects :
- 0301 basic medicine
Operational taxonomic unit
Bolidomonas
Oceans and Seas
Molecular Sequence Data
Antarctic Regions
DNA, Ribosomal
Microbiology
rail
03 medical and health sciences
Monophyly
Mediterranean sea
Algae
Mediterranean Sea
Seawater
14. Life underwater
Clade
Phylogeny
Ecology, Evolution, Behavior and Systematics
[SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography
Diatoms
biology
Ecology
rail.locomotive_class
Biodiversity
biology.organism_classification
030104 developmental biology
Phytoplankton
Bolidophyceae
Original Article
Taxonomy (biology)
Subjects
Details
- Language :
- English
- ISSN :
- 17517362 and 17517370
- Database :
- OpenAIRE
- Journal :
- ISME Journal, ISME Journal, Nature Publishing Group, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩, The ISME Journal, Europe PubMed Central, ISME Journal, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩
- Accession number :
- edsair.doi.dedup.....5974befcef2d82d5e6586919c38733e8
- Full Text :
- https://doi.org/10.1038/ismej.2016.38⟩