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Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms

Authors :
Colomban de Vargas
Daniel Vaulot
Stéphane Audic
Shinya Yoshikawa
Mary-Hélène Noël
Akira Kuwata
Mitsunobu Kamiya
Priscillia Gourvil
Adriana Lopes dos Santos
Kaori Ohki
Mutsuo Ichinomiya
Prefectural University of Kumamoto
Diversité et Interactions au sein du Plancton Océanique (DIPO)
Adaptation et diversité en milieu marin (AD2M)
Station biologique de Roscoff [Roscoff] (SBR)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff [Roscoff] (SBR)
Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
Fukui Prefectural University
University of Fukui
Evolution des Protistes et Ecosystèmes Pélagiques (EPEP)
National Institute for Environmental Studies (NIES)
Tohoku National Fisheries Research Institute
National Fisheries Research Institute
Source :
ISME Journal, ISME Journal, Nature Publishing Group, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩, The ISME Journal, Europe PubMed Central, ISME Journal, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩
Publication Year :
2016
Publisher :
HAL CCSD, 2016.

Abstract

International audience; Bolidomonas is a genus of picoplanktonic flagellated algae that is closely related to diatoms. Triparma laevis, a species belonging to the Parmales, which are small cells with a siliceous covering, has been shown to form a monophyletic group with Bolidomonas. We isolated several novel strains of Bolidophyceae that have permitted further exploration of the diversity of this group using nuclear, plastidial and mitochondrial genes. The resulting phylogenetic data led us to formally emend the taxonomy of this group to include the Parmales within the Bolidophyceae, to combine Bolidomonas within Triparma and to define a novel species, Triparma eleuthera sp. nov. The global distribution of Bolidophyceae was then assessed using environmental sequences available in public databases, as well as a large 18S rRNA V9 metabarcode data set from the Tara Oceans expedition. Bolidophyceans appear ubiquitous throughout the sampled oceans but always constitute a minor component of the phytoplankton community, corresponding to at most ~ 4% of the metabarcodes from photosynthetic groups (excluding dinoflagellates). They are ~ 10 times more abundant in the small size fraction (0.8– 5 μm) than in larger size fractions. T. eleuthera sp. nov. constitutes the most abundant and most widespread operational taxonomic unit (OTU) followed by T. pacifica, T. mediterranea and the T. laevis clade. The T. mediterranea OTU is characteristic of Mediterranean Sea surface waters and the T. laevis clade OTU is most prevalent in colder waters, in particular off Antarctica.

Details

Language :
English
ISSN :
17517362 and 17517370
Database :
OpenAIRE
Journal :
ISME Journal, ISME Journal, Nature Publishing Group, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩, The ISME Journal, Europe PubMed Central, ISME Journal, 2016, 10, pp.2419-2434. ⟨10.1038/ismej.2016.38⟩
Accession number :
edsair.doi.dedup.....5974befcef2d82d5e6586919c38733e8
Full Text :
https://doi.org/10.1038/ismej.2016.38⟩