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An intensive study plot to investigate chestnut tree reproduction
- Source :
- Annals of Forest Science, Annals of Forest Science, Springer Nature (since 2011)/EDP Science (until 2010), 2021, 78 (4), pp.90. ⟨10.1007/s13595-021-01104-w⟩
- Publication Year :
- 2021
- Publisher :
- HAL CCSD, 2021.
-
Abstract
- Key message Pollination is a key step for fruit production. To provide a tool for future in-depth analysis of pollination in chestnut, we describe in detail a chestnut orchard (location, genotype, phenotype and seed-set of all trees). Context Chestnuts, which are insect-pollinated trees, have been massively planted around the world for nut production. Orchards are planted with clonal varieties selected from crosses between the European chestnuts (Castanea sativa) and Japanese chestnuts (C. crenata) or Chinese chestnuts (C. mollissima) because these two last species are tolerant to blight and ink diseases. Aims To characterize chestnut genetic resources and accurately model male and female fitness as well as pollen exchanges in orchards, we characterized all chestnuts of the INRAE chestnut germplasm collection located near Bordeaux (France). Methods All chestnut trees were geolocated and genotyped using 79 SNP and 98 SSR loci. We scored their flowering phenology using chestnut BBCH scale and precisely described their phenotype (height, diameter a breast height (DBH), canopy diameter…), their capacity to produce pollen (flower type, catkins length…) and their fruit production (number of burrs, seed-set…). Results We geolocated 275 trees and genotyped 273 of them. We identified 115 unique genotypes and assigned each genotype to species. To assess phenology, we evaluated 244 trees twice a week, for 6 weeks from early June to mid-July. We also described tree phenotypes with 11 variables, pollen production with 5 variables and fruit production with 3 variables. All measures were recorded in 2018 except seed set that was measured two consecutive years, in 2018 and 2019. Conclusion The data collected is very detailed and allows modelling precisely pollen exchanges between trees. Parts of this data have been successfully published in scientific articles. Data are available at: https://data.inrae.fr/dataset.xhtml?persistentId=doi:10.15454/GSJSWW Associated metadata are available at:https://metadata-afs.nancy.inra.fr/geonetwork/srv/fre/catalog.search#/metadata/02c5ca07-1536-4f89-9a0c-9e8d44a91287
- Subjects :
- 0106 biological sciences
Flower types
Genotype
media_common.quotation_subject
[SDV]Life Sciences [q-bio]
SNP
Biology
Fagaceae
010603 evolutionary biology
01 natural sciences
Plot (graphics)
03 medical and health sciences
Formal analysis
Varietal identification
Male sterility
Astaminate
[SDV.BV]Life Sciences [q-bio]/Vegetal Biology
030304 developmental biology
media_common
Investigation
0303 health sciences
Ecology
Chataignier
Forestry
Species assignation
15. Life on land
Resources
chataigne
Tree (data structure)
[SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breeding
Phenotype
Staminate
Fruit
Arbre fruitier
Castanea sp
Reproduction
Male sterility Conceptualization
Subjects
Details
- Language :
- English
- ISSN :
- 12864560 and 1297966X
- Database :
- OpenAIRE
- Journal :
- Annals of Forest Science, Annals of Forest Science, Springer Nature (since 2011)/EDP Science (until 2010), 2021, 78 (4), pp.90. ⟨10.1007/s13595-021-01104-w⟩
- Accession number :
- edsair.doi.dedup.....5842b1b2499a5b2b42089a33c71d9b16