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Detection of a novel active transposable element in Caldicellulosiruptor hydrothermalis and a new search for elements in this genus
- Source :
- Journal of Industrial Microbiology and Biotechnology. 40:517-521
- Publication Year :
- 2013
- Publisher :
- Oxford University Press (OUP), 2013.
-
Abstract
- We show that a previously annotated hypothetical protein is the transposase of a new and active IS element, ISCahy1, widespread in Caldicellulosiruptor species. Transposition generated an 11-bp direct repeat at the insertion site in Caldicellulosiruptor hydrothermalis, suggesting a cut-and-paste mechanism. The discovery of an active insertion sequence in Caldicellulosiruptor species led to a survey of potential IS elements in the genome sequences of eight Caldicellulosiruptor species that identified several new elements, including one novel to this genus.
- Subjects :
- Genetics
Transposable element
Base Sequence
Caldicellulosiruptor
Molecular Sequence Data
Hypothetical protein
Transposases
Bioengineering
Computational biology
Biology
Gram-Positive Bacteria
biology.organism_classification
Applied Microbiology and Biotechnology
Genome
Article
Transposition (music)
DNA Transposable Elements
Direct repeat
Insertion sequence
Genome, Bacterial
Transposase
Biotechnology
Subjects
Details
- ISSN :
- 14765535 and 13675435
- Volume :
- 40
- Database :
- OpenAIRE
- Journal :
- Journal of Industrial Microbiology and Biotechnology
- Accession number :
- edsair.doi.dedup.....57c13bd2967e4ddc5c9c2f2f2a1add78