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Salt bridge in the conserved His-Asp cluster in Gloeobacter rhodopsin contributes to trimer formation
- Source :
- FEBS letters. 587(4)
- Publication Year :
- 2012
-
Abstract
- Gloeobacter rhodopsin (GR) is a eubacterial proton pump having a highly conserved histidine near the retinal Schiff base counter-ion, aspartate. Various interactions between His and Asp of the eubacterial proton pump have been reported. Here, we showed the pH-dependent trimer/monomer transition of GR in the presence of dodecyl-β-d-maltoside by size-exclusion chromatography. The pH dependence was closely related to the protonation state of the counter-ion, Asp121. For the H87M mutant, pH dependence disappeared and a monomer became dominant. We concluded that the formation or breaking of the salt bridge between His87 and Asp121 inside the protein changes the quaternary structure.Structured summary of protein interactionsRhodopsin and Rhodopsin bind by molecular sieving (View interaction)Rhodopsin and Rhodopsin bind by molecular sieving (View interaction: 1, 2)
- Subjects :
- Models, Molecular
Gloeobacter
Stereochemistry
Amino Acid Motifs
Detergents
Biophysics
Trimer
Protonation
Cyanobacteria
Biochemistry
Bacterial Proteins
Glucosides
Structural Biology
Size-exclusion chromatography
Genetics
Quaternary structure
Histidine
Amino Acid Sequence
Protein Structure, Quaternary
Molecular Biology
Conserved Sequence
Schiff Bases
Microbial rhodopsin
Aspartic Acid
Proteorhodopsin
biology
Chemistry
Circular Dichroism
Circular dichroism spectroscopy
Sensory rhodopsin II
Bacteriorhodopsin
Cell Biology
Hydrogen-Ion Concentration
biology.organism_classification
Recombinant Proteins
Histidine-Aspartate cluster
Amino Acid Substitution
Histidine–Aspartate cluster
Rhodopsin
Bacteriorhodopsins
biology.protein
Chromatography, Gel
Mutant Proteins
sense organs
Salt bridge
Subjects
Details
- ISSN :
- 18733468
- Volume :
- 587
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- FEBS letters
- Accession number :
- edsair.doi.dedup.....5706245d64543a9e6847f3d11df8a7a3