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The structure of Trametes versicolor glutathione transferase Omega 3S bound to its conjugation product glutathionyl-phenethylthiocarbamate reveals plasticity of its active site
- Source :
- Protein Science, Protein Science, Wiley, 2019, 28 (6), pp.1143-1150. ⟨10.1002/pro.3620⟩, Protein Sci
- Publication Year :
- 2019
- Publisher :
- HAL CCSD, 2019.
-
Abstract
- Trametes versicolor glutathione transferase Omega 3S (TvGSTO3S) catalyzes the conjugation of isothiocyanates (ITC) with glutathione (GSH).Previously, this isoform was investigated in depth both biochemically and structurally. Structural analysis of complexes revealed the presence of a GSH binding site (G site) and a deep hydrophobic binding site (H site) able to bind plant polyphenols. In the present study, crystals of apo TvGSTO3S were soaked with glutathionyl-phenethylthiocarbamate, the product of the reaction between GSH and phenethyl isothiocyanate (PEITC).On the basis of this crystal structure, we show that the phenethyl moiety binds in a new site at loop beta(2)-alpha(2) while the glutathionyl part exhibits a particular conformation that occupies both the G site and the entrance to the H site. This binding mode is allowed by a conformational change of the loop beta(2)-alpha(2) at the enzyme active site. It forms a hydrophobic slit that stabilizes the phenethyl group at a distinct site from the previously described H site.Structural comparison of TvGSTO3S with drosophila DmGSTD2 suggests that this flexible loop could be the region that binds PEITC for both isoforms. These structural features are discussed in a catalytic context.
- Subjects :
- Models, Molecular
Conformational change
Phenethyl isothiocyanate
Stereochemistry
liaison hydrophobe
[SDV]Life Sciences [q-bio]
Context (language use)
champignon lignivore
Biochemistry
03 medical and health sciences
chemistry.chemical_compound
trametes versicolor
Isothiocyanates
glutathione transferase
Transferase
Binding site
glutathion
Molecular Biology
polyphenols
030304 developmental biology
X-ray crystallography
Trametes
0303 health sciences
Binding Sites
Molecular Structure
biology
wood destroying fungi
030302 biochemistry & molecular biology
Active site
Glutathione
chemistry
Isothiocyanate
Biocatalysis
biology.protein
Protein Structure Reports
isothiocyanate
Subjects
Details
- Language :
- English
- ISSN :
- 09618368 and 1469896X
- Database :
- OpenAIRE
- Journal :
- Protein Science, Protein Science, Wiley, 2019, 28 (6), pp.1143-1150. ⟨10.1002/pro.3620⟩, Protein Sci
- Accession number :
- edsair.doi.dedup.....56acc52bbb0a5aca7f3046529d134094
- Full Text :
- https://doi.org/10.1002/pro.3620⟩