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Nested core collections maximizing genetic diversity in Arabidopsis thaliana
- Source :
- McKhann, H I, Camilleri, C, Bérard, A, Bataillon, T, David, J L, Reboud, X, Le Corre, V, Caloustian, C, Gut, I G & Brunel, D 2004, ' Nested core collections maximizing genetic diversity in Arabidopsis thaliana ', Plant Journal, vol. 38, no. 1, pp. 193-202 . https://doi.org/10.1111/j.1365-313X.2004.02034.x, Plant Journal, Plant Journal, Wiley, 2004, pp.193-202
- Publication Year :
- 2004
-
Abstract
- Summary The successful exploitation of natural genetic diversity requires a basic knowledge of the extent of the variation present in a species. To study natural variation in Arabidopsis thaliana, we defined nested core collections maximizing the diversity present among a worldwide set of 265 accessions. The core collections were generated based on DNA sequence data from a limited number of fragments evenly distributed in the genome and were shown to successfully capture the molecular diversity in other loci as well as the morphological diversity. The core collections are available to the scientific community and thus provide an important resource for the study of genetic variation and its functional consequences in Arabidopsis. Moreover, this strategy can be used in other species to provide a rational framework for undertaking diversity surveys, including single nucleotide polymorphism (SNP) discovery and phenotyping, allowing the utilization of genetic variation for the study of complex traits.
- Subjects :
- 0106 biological sciences
DNA, Plant
Arabidopsis
Single-nucleotide polymorphism
Plant Science
01 natural sciences
Genome
Polymorphism, Single Nucleotide
DNA sequencing
[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics
03 medical and health sciences
[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants genetics
Genetic variation
Genetics
Arabidopsis thaliana
ComputingMilieux_MISCELLANEOUS
030304 developmental biology
Genetic association
0303 health sciences
Genetic diversity
biology
Genetic Variation
Cell Biology
15. Life on land
biology.organism_classification
Phenotype
Evolutionary biology
human activities
Genome, Plant
010606 plant biology & botany
Subjects
Details
- ISSN :
- 09607412 and 1365313X
- Volume :
- 38
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- The Plant journal : for cell and molecular biology
- Accession number :
- edsair.doi.dedup.....56a99c8e944418a58abed6ddd0be30f5