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Effects of Transmembrane α-Helix Length and Concentration on Phase Behavior in Four-Component Lipid Mixtures: A Molecular Dynamics Study
- Source :
- The Journal of Physical Chemistry B. 120:4064-4077
- Publication Year :
- 2016
- Publisher :
- American Chemical Society (ACS), 2016.
-
Abstract
- We used coarse-grained molecular dynamics simulations to examine the effects of transmembrane α-helical WALP peptides on the behavior of four-component lipid mixtures. These mixtures contain a high-melting temperature (high-Tm) lipid, a nanodomain-inducing low-Tm lipid, a macrodomain-inducing low-Tm lipid and cholesterol to model the outer leaflet of cell plasma membranes. In a series of simulations, we incrementally replace the nanodomain-inducing low-Tm lipid by the macrodomain-inducing low-Tm lipid and measure how lipid and phase properties are altered by the addition of WALPs of different length. Regardless of the ratio of the two low-Tm lipids, shorter WALPs increase domain size and all WALPs increase domain alignment between the two leaflets. These effects are smallest for the longest WALP tested, and increase with increasing WALP concentration. Thus, our simulations explain the experimental observation that WALPs induce macroscopic domains in otherwise nanodomain-forming lipid-only mixtures (unpublished). Since the cell plasma membrane contains a large fraction of transmembrane proteins, these findings link the behavior of lipid-only model membranes in vitro to phase behavior in vivo.
- Subjects :
- Protein Conformation, alpha-Helical
0301 basic medicine
Four component
Chemistry
Cholesterol
Molecular Dynamics Simulation
Lipids
Transmembrane protein
Surfaces, Coatings and Films
03 medical and health sciences
Crystallography
Molecular dynamics
chemistry.chemical_compound
030104 developmental biology
Membrane
Phase (matter)
Helix
Materials Chemistry
lipids (amino acids, peptides, and proteins)
Lipid bilayer phase behavior
Physical and Theoretical Chemistry
Peptides
Subjects
Details
- ISSN :
- 15205207 and 15206106
- Volume :
- 120
- Database :
- OpenAIRE
- Journal :
- The Journal of Physical Chemistry B
- Accession number :
- edsair.doi.dedup.....54f9e664c7a8d03341cd62a2d2f210ff
- Full Text :
- https://doi.org/10.1021/acs.jpcb.6b00611