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Crystallization and X-ray analysis of Borrelia burgdorferi β-barrel assembly machinery A

Authors :
Changhui Wang
Qin Xiaochun
Wen Kangning
Hui Li
Dong Shishang
Qianqian Yu
Chu Hongguan
Source :
Acta Crystallogr F Struct Biol Commun
Publication Year :
2020

Abstract

Mitochondria, chloroplasts and several species of bacteria have outer membrane proteins (OMPs) that perform many essential biological functions. The β-barrel assembly machinery (BAM) complex is one of the OMPs of Borrelia burgdorferi, the pathogenic spirochete that causes Lyme disease, and its BamA component (BbBamA) includes a C-terminal β-barrel domain and five N-terminal periplasmic polypeptide-transport-associated (POTRA) domains, which together perform a central transport function. In the current work, the production, crystallization and X-ray analysis of the three N-terminal POTRA domains of BbBamA (BbBamA-POTRA P1–P3; residues 30–273) were carried out. The crystals of BbBamA-POTRA P1–P3 belonged to space group P21, with unit-cell parameters a = 45.353, b = 111.538, c = 64.376 Å, β = 99.913°. The Matthews coefficient was calculated to be 2.92 Å3 Da−1, assuming the presence of two molecules per asymmetric unit, and the corresponding solvent content was 57.9%. Owing to the absence of an ideal homology model, numerous attempts to solve the BbBamA-POTRA P1–P3 structure using molecular replacement (MR) failed. In order to solve the structure, further trials using selenomethionine derivatization are currently being carried out.

Details

ISSN :
2053230X
Volume :
76
Issue :
Pt 6
Database :
OpenAIRE
Journal :
Acta crystallographica. Section F, Structural biology communications
Accession number :
edsair.doi.dedup.....537a0e181612cc040867e2ac58647603