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Insights into Exo- and Endoglucanase Activities of Family 6 Glycoside Hydrolases from Podospora anserina
- Source :
- Applied and Environmental Microbiology, Applied and Environmental Microbiology, American Society for Microbiology, 2013, 79 (14), pp.4220-4229. ⟨10.1128/AEM.00327-13⟩, Applied and Environmental Microbiology, 2013, 79 (14), pp.4220-4229. ⟨10.1128/AEM.00327-13⟩, Applied and Environmental Microbiology 14 (79), 4220-4229. (2013)
- Publication Year :
- 2013
- Publisher :
- American Society for Microbiology, 2013.
-
Abstract
- The ascomycete Podospora anserina is a coprophilous fungus that grows at late stages on droppings of herbivores. Its genome encodes a large diversity of carbohydrate-active enzymes. Among them, four genes encode glycoside hydrolases from family 6 (GH6), the members of which comprise putative endoglucanases and exoglucanases, some of them exerting important functions for biomass degradation in fungi. Therefore, this family was selected for functional analysis. Three of the enzymes, P. anserina Cel6A ( Pa Cel6A), Pa Cel6B, and Pa Cel6C, were functionally expressed in the yeast Pichia pastoris . All three GH6 enzymes hydrolyzed crystalline and amorphous cellulose but were inactive on hydroxyethyl cellulose, mannan, galactomannan, xyloglucan, arabinoxylan, arabinan, xylan, and pectin. Pa Cel6A had a catalytic efficiency on cellotetraose comparable to that of Trichoderma reesei Cel6A ( Tr Cel6A), but Pa Cel6B and Pa Cel6C were clearly less efficient. Pa Cel6A was the enzyme with the highest stability at 45�C, while Pa Cel6C was the least stable enzyme, losing more than 50% of its activity after incubation at temperatures above 30�C for 24 h. In contrast to Tr Cel6A, all three studied P. anserina GH6 cellulases were stable over a wide range of pHs and conserved high activity at pH values of up to 9. Each enzyme displayed a distinct substrate and product profile, highlighting different modes of action, with Pa Cel6A being the enzyme most similar to Tr Cel6A. Pa Cel6B was the only enzyme with higher specific activity on carboxymethylcellulose (CMC) than on Avicel and showed lower processivity than the others. Structural modeling predicts an open catalytic cleft, suggesting that Pa Cel6B is an endoglucanase.
- Subjects :
- 0106 biological sciences
hydroxyethylcellulose
dégradation de la biomasse
arabinane
[SDV.BIO]Life Sciences [q-bio]/Biotechnology
glucanase
ph
01 natural sciences
Applied Microbiology and Biotechnology
Polymerase Chain Reaction
Podospora anserina
xylane
arabinoxylane
chemistry.chemical_compound
Glycoside hydrolase
glycoside hydrolase
galactomannane
Cloning, Molecular
DNA, Fungal
Trichoderma reesei
chemistry.chemical_classification
0303 health sciences
Podospora
Ecology
biology
excrément
Microbiology and Parasitology
incubation
Microbiologie et Parasitologie
Xyloglucan
[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology
Biochemistry
xyloglucane
champignon ascomycete
substrat
mannane
cellulose cristalline
Biotechnology
DNA, Complementary
Glycoside Hydrolases
Molecular Sequence Data
herbivore
Cellulase
Biotechnologies
Pichia pastoris
03 medical and health sciences
podospora anserina
010608 biotechnology
température
Amino Acid Sequence
endoglucanase
Enzymology and Protein Engineering
coprophilie
030304 developmental biology
pectine
pichia pastoris
trichoderma reesei
ascomycète
carboxyméthylcellulose
15. Life on land
biology.organism_classification
exoglucanase
glucide
enzyme
Enzyme
chemistry
biology.protein
incubation en conditions contrôlees
Sequence Alignment
Food Science
Subjects
Details
- Language :
- English
- ISSN :
- 00992240 and 10985336
- Database :
- OpenAIRE
- Journal :
- Applied and Environmental Microbiology, Applied and Environmental Microbiology, American Society for Microbiology, 2013, 79 (14), pp.4220-4229. ⟨10.1128/AEM.00327-13⟩, Applied and Environmental Microbiology, 2013, 79 (14), pp.4220-4229. ⟨10.1128/AEM.00327-13⟩, Applied and Environmental Microbiology 14 (79), 4220-4229. (2013)
- Accession number :
- edsair.doi.dedup.....533143e30328ffecf8629139afcff867
- Full Text :
- https://doi.org/10.1128/AEM.00327-13⟩