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Marinobacter persicus sp. nov., a moderately halophilic bacterium from a saline lake in Iran
- Source :
- Antonie van Leeuwenhoek. 104:47-54
- Publication Year :
- 2013
- Publisher :
- Springer Science and Business Media LLC, 2013.
-
Abstract
- A Gram-negative, non-endospore-forming, rod shaped, strictly aerobic, moderately halophilic bacterium, designated strain M9BT, was isolated from the hypersaline lake Aran-Bidgol in Iran. Cells of strain M9BT were found to be motile and produce colonies with an orange-yellow pigment. Growth was determined to occur between 5 and 20 % (w/v) NaCl and the isolate grew optimally at 7.5–10 % (v/w) NaCl. The optimum pH and temperature for growth of the strain were determined to be pH 7.0 and 35 °C, respectively, while it was able to grow over pH and temperature ranges of 6–8 and 25–45 °C, respectively. Phylogenetic analysis based on the comparison of 16S rRNA gene sequences revealed that strain M9BT is a member of the genus Marinobacter. The closest relative to this strain was found to be Marinobacter hydrocarbonoclasticus MBIC 1303T with a similarity level of 97.7 %. DNA–DNA hybridization between the novel isolate and this phylogenetically related species was 13 ± 2 %. The major cellular fatty acids of the isolate were identified as C16:0, C19:1 ω6c, C18:1 ω9c and C16:1 ω9c. The polar lipid pattern of strain M9BT was determined to consist of phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylserine and three phospholipids. Ubiquinone 9 (Q-9) was the only lipoquinone detected. The G+C content of the genomic DNA of this strain was determined to be 58.6 mol%. Phenotypic characteristics, phylogenetic analysis and DNA–DNA relatedness data suggest that this strain represents a novel species of the genus Marinobacter, for which the name Marinobacter persicus sp. nov. is proposed. The type strain of Marinobacter persicus is strain M9BT (=IBRC-M 10445T = CCM 7970T = CECT 7991T = KCTC 23561T).
- Subjects :
- DNA, Bacterial
Salinity
Molecular Sequence Data
Iran
Biology
medicine.disease_cause
Microbiology
Marinobacter persicus
Species Specificity
RNA, Ribosomal, 16S
Sequence Homology, Nucleic Acid
Marinobacter
medicine
Marinobacter hydrocarbonoclasticus
Molecular Biology
Phylogeny
Base Composition
Base Sequence
Strain (chemistry)
Fatty Acids
Quinones
Temperature
General Medicine
Hypersaline lake
Hydrogen-Ion Concentration
Ribosomal RNA
biology.organism_classification
16S ribosomal RNA
Lipids
Halophile
Lakes
RNA, Bacterial
Phenotype
Water Microbiology
Sequence Alignment
Bacteria
Subjects
Details
- ISSN :
- 15729699 and 00036072
- Volume :
- 104
- Database :
- OpenAIRE
- Journal :
- Antonie van Leeuwenhoek
- Accession number :
- edsair.doi.dedup.....51a460bc626b29f1bca35e929ddb8ee0