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Genomic and Transcriptomic Analyses of Bioluminescence Genes in the Enope Squid Watasenia scintillans

Authors :
Masa-aki Yoshida
Kei Yura
Kazuhiko Nakabayashi
Satomi Funahashi
Yuki Akizuki
Ryuhei Minei
Kazuho Ikeo
Atsushi Ogura
Junichi Imoto
Yuri L. Kawai
Source :
Marine Biotechnology (New York, N.y.)
Publication Year :
2020
Publisher :
Springer Science and Business Media LLC, 2020.

Abstract

Watasenia scintillans, a sparkling enope squid, has bioluminescence organs to illuminate its body with its own luciferase activity. To clarify the molecular mechanism underlying its scintillation, we analysed high-throughput sequencing data acquired previously and obtained draft genome sequences accomplished with comparative genomic data among the cephalopods. The genome mapped by transcriptome data showed that (1) RNA editing contributed to transcriptome variation of lineage specific genes, such as W. scintillans luciferase, and (2) two types of luciferase enzymes were characterized with reasonable 3D models docked to a luciferin molecule. We report two different types of luciferase in one organism and possibly related to variety of colour types in the W. scintillans fluorescent organs. Electronic supplementary material The online version of this article (10.1007/s10126-020-10001-8) contains supplementary material, which is available to authorized users.

Details

ISSN :
14362236 and 14362228
Volume :
22
Database :
OpenAIRE
Journal :
Marine Biotechnology
Accession number :
edsair.doi.dedup.....51259e402f42028fc31eead6a804015a