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Introducing Spectral Structure Activity Relationship (S-SAR) Analysis. Application to Ecotoxicology
- Source :
- International Journal of Molecular Sciences, Vol 8, Iss 5, Pp 363-391 (2007), International Journal of Molecular Sciences, International Journal of Molecular Sciences; Volume 8; Issue 5; Pages: 363-391
- Publication Year :
- 2007
- Publisher :
- MDPI AG, 2007.
-
Abstract
- A novel quantitative structure-activity (property) relationship model, namely Spectral-SAR, is presented in an exclusive algebrai c way replacing the old-fashioned multi-regression one. The actual S-SAR method interprets structural descriptors as vectors in a generic data space that is further mapped into a full orthogonal space by means of the Gram-Schmidt algorithm. Then, by coordinated transformation between the data and orthogonal spaces, the S-SAR equation is given under simple determinant form for any chemical-biological interactions under study. While proving to give the same analytical equation and correlation results with standard mult ivariate statistics, the actual S-SAR frame allows the introduction of the spectral norm as a valid substitute for the correlation factor, while also having the advantage to design t he various related SAR models through the introduced "minimal spectral path" rule. An app lication is given performing a complete S-SAR analysis upon the Tetrahymena pyriformis ciliate species employing its reported eco-toxicity activities among relevant classes of x enobiotics. By representing the spectral norm of the endpoint models against the concerned s tructural coordinates, the obtained S-SAR endpoints hierarchy scheme opens the perspective to further design the eco- toxicological test batteries with organisms from di fferent species.
- Subjects :
- Matrix norm
Biology
Space (mathematics)
Bioinformatics
Full Research Paper
Catalysis
Xenobiotics
Inorganic Chemistry
lcsh:Chemistry
Perspective (geometry)
Simple (abstract algebra)
Gram-Schmidt algorithm
Physical and Theoretical Chemistry
skin and connective tissue diseases
Molecular Biology
lcsh:QH301-705.5
Spectroscopy
Multivariate correlations
Tetrahymena pyriformis
Hierarchy (mathematics)
fungi
Organic Chemistry
Frame (networking)
General Medicine
Computer Science Applications
body regions
Transformation (function)
lcsh:Biology (General)
lcsh:QD1-999
Path (graph theory)
Algorithm
Subjects
Details
- Language :
- English
- ISSN :
- 14220067
- Volume :
- 8
- Issue :
- 5
- Database :
- OpenAIRE
- Journal :
- International Journal of Molecular Sciences
- Accession number :
- edsair.doi.dedup.....4f28200f9ce05d205bd31e3dea522617