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Artificial Intelligence-Based Segmentation of Residual Tumor in Histopathology of Pancreatic Cancer after Neoadjuvant Treatment

Authors :
Boris V. Janssen
Rutger Theijse
Johanna W. Wilmink
Marc G. Besselink
Stijn van Roessel
Arantza Farina
Antonie Berkel
Rik de Ruiter
Geert Kazemier
Olivier R. Busch
Onno J. de Boer
Pieter Valkema
J. Huiskens
Joanne Verheij
Graduate School
Surgery
AGEM - Amsterdam Gastroenterology Endocrinology Metabolism
Oncology
Pathology
ACS - Heart failure & arrhythmias
CCA - Imaging and biomarkers
Source :
Cancers, Cancers, Vol 13, Iss 5089, p 5089 (2021), Cancers, 13(20):5089. Multidisciplinary Digital Publishing Institute (MDPI), Volume 13, Issue 20
Publication Year :
2021
Publisher :
MDPI, 2021.

Abstract

Background: Histologic examination of resected pancreatic cancer after neoadjuvant therapy (NAT) is used to assess the effect of NAT and may guide the choice for adjuvant treatment. However, evaluating residual tumor burden in pancreatic cancer is challenging given tumor response heterogeneity and challenging histomorphology. Artificial intelligence techniques may offer a more reproducible approach. Methods: From 64 patients, one H&amp<br />E-stained slide of resected pancreatic cancer after NAT was digitized. Three separate classes were manually outlined in each slide (i.e., tumor, normal ducts, and remaining epithelium). Corresponding segmentation masks and patches were generated and distributed over training, validation, and test sets. Modified U-nets with varying encoders were trained, and F1 scores were obtained to express segmentation accuracy. Results: The highest mean segmentation accuracy was obtained using modified U-nets with a DenseNet161 encoder. Tumor tissue was segmented with a high mean F1 score of 0.86, while the overall multiclass average F1 score was 0.82. Conclusions: This study shows that artificial intelligence-based assessment of residual tumor burden is feasible given the promising obtained F1 scores for tumor segmentation. This model could be developed into a tool for the objective evaluation of the response to NAT and may potentially guide the choice for adjuvant treatment.

Details

Language :
English
ISSN :
20726694
Volume :
13
Issue :
20
Database :
OpenAIRE
Journal :
Cancers
Accession number :
edsair.doi.dedup.....4d049f5949d480db2e4bcfb3a5cc3f13