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Artificial Intelligence-Based Segmentation of Residual Tumor in Histopathology of Pancreatic Cancer after Neoadjuvant Treatment
- Source :
- Cancers, Cancers, Vol 13, Iss 5089, p 5089 (2021), Cancers, 13(20):5089. Multidisciplinary Digital Publishing Institute (MDPI), Volume 13, Issue 20
- Publication Year :
- 2021
- Publisher :
- MDPI, 2021.
-
Abstract
- Background: Histologic examination of resected pancreatic cancer after neoadjuvant therapy (NAT) is used to assess the effect of NAT and may guide the choice for adjuvant treatment. However, evaluating residual tumor burden in pancreatic cancer is challenging given tumor response heterogeneity and challenging histomorphology. Artificial intelligence techniques may offer a more reproducible approach. Methods: From 64 patients, one H&amp<br />E-stained slide of resected pancreatic cancer after NAT was digitized. Three separate classes were manually outlined in each slide (i.e., tumor, normal ducts, and remaining epithelium). Corresponding segmentation masks and patches were generated and distributed over training, validation, and test sets. Modified U-nets with varying encoders were trained, and F1 scores were obtained to express segmentation accuracy. Results: The highest mean segmentation accuracy was obtained using modified U-nets with a DenseNet161 encoder. Tumor tissue was segmented with a high mean F1 score of 0.86, while the overall multiclass average F1 score was 0.82. Conclusions: This study shows that artificial intelligence-based assessment of residual tumor burden is feasible given the promising obtained F1 scores for tumor segmentation. This model could be developed into a tool for the objective evaluation of the response to NAT and may potentially guide the choice for adjuvant treatment.
- Subjects :
- Cancer Research
medicine.medical_specialty
medicine.medical_treatment
pancreatic cancer
Residual
Article
Neoadjuvant treatment
Pancreatic cancer
medicine
Segmentation
neoadjuvant therapy
Neoadjuvant therapy
RC254-282
tumor response scoring
business.industry
Neoplasms. Tumors. Oncology. Including cancer and carcinogens
medicine.disease
artificial intelligence
machine learning
Oncology
Nat
histopathology
Histopathology
Artificial intelligence
business
F1 score
Subjects
Details
- Language :
- English
- ISSN :
- 20726694
- Volume :
- 13
- Issue :
- 20
- Database :
- OpenAIRE
- Journal :
- Cancers
- Accession number :
- edsair.doi.dedup.....4d049f5949d480db2e4bcfb3a5cc3f13