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Reporting of methodologies used for clonogenic assays to determine radiosensitivity

Authors :
Narisa Dewi Maulany Darwis
Shuichiro Komatsu
Tatsuya Ohno
Ankita Nachankar
Atsushi Shibata
Yuka Komatsu
Takahiro Oike
Source :
Journal of Radiation Research
Publication Year :
2020
Publisher :
Oxford University Press (OUP), 2020.

Abstract

Radiotherapy treatment strategies should be personalized based on the radiosensitivity of individual tumors. Clonogenic assays are the gold standard method for in vitro assessment of radiosensitivity. Reproducibility is the critical factor for scientific rigor; however, this is reduced by insufficient reporting of methodologies. In reality, the reporting standards of methodologies pertaining to clonogenic assays remain unclear. To address this, we performed a literature search and qualitative analysis of the reporting of methodologies pertaining to clonogenic assays. A comprehensive literature review identified 1672 papers that report the radiosensitivity of human cancer cells based on clonogenic assays. From the identified papers, important experimental parameters (i.e. number of biological replicates, technical replicates, radiation source and dose rate) were recorded and analyzed. We found that, among the studies, (i) 30.5% did not report biological or technical replicates; (ii) 47.0% did not use biological or technical replicates; (iii) 3.8% did not report the radiation source; and (iv) 32.3% did not report the dose rate. These data suggest that reporting of methodologies pertaining to clonogenic assays in a considerable number of previously published studies is insufficient, thereby threatening reproducibility. This highlights the need to raise awareness of standardization of the methodologies used to conduct clonogenic assays.

Details

ISSN :
13499157 and 04493060
Volume :
61
Database :
OpenAIRE
Journal :
Journal of Radiation Research
Accession number :
edsair.doi.dedup.....4c56233b322563782b0274e37aeec602
Full Text :
https://doi.org/10.1093/jrr/rraa064