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Signatures of selection in the human olfactory receptor OR5I1 gene
- Source :
- Recercat. Dipósit de la Recerca de Catalunya, instname
- Publication Year :
- 2007
-
Abstract
- The human olfactory receptor repertoire is reduced in comparison to other mammals/nand to other non-human primates. Nonetheless, this olfactory decline opens an opportunity for/nevolutionary innovation and improvement. In the present study, we focus on an olfactory/nreceptor gene, OR5I1, which had previously been shown to present an excess of amino acid/nreplacement substitutions between humans and chimpanzees. We analyze the genetic/nvariation in OR5I1 in a large worldwide human panel and find an excess of derived alleles/nsegregating at relatively high frequencies in all populations. Additional evidence for selection/nincludes departures from neutrality in allele frequency spectra tests but no unusually extended/nhaplotype structure. Moreover, molecular structural inference suggests that one of the/nnonsynonymous polymorphisms defining the presumably adaptive protein form of OR5I1/nmay alter the functional binding properties of the olfactory receptor. These results are/ncompatible with positive selection having modeled the pattern of variation found in the OR5I1/ngene and with a relatively ancient, mild selective sweep predating the “Out of Africa”/nexpansion of modern humans.
- Subjects :
- Nonsynonymous substitution
Pan troglodytes
Single-nucleotide polymorphism
Olfactory receptors
Biology
Receptors, Odorant
Receptors, G-Protein-Coupled
Evolution, Molecular
Species Specificity
Genetic variation
Genetics
medicine
Animals
Humans
Allele
Molecular Biology
Gene
Allele frequency
Ecology, Evolution, Behavior and Systematics
Olfactory receptor
Polymorphism, Genetic
Models, Genetic
Selecció natural
Single nucleotide polymorphisms
Positive selection
medicine.anatomical_structure
Amino Acid Substitution
Human variation
Genètica humana -- Variació
Selective sweep
Subjects
Details
- ISSN :
- 15371719
- Volume :
- 25
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Molecular biology and evolution
- Accession number :
- edsair.doi.dedup.....4bc24920f36497409ba82004e82f5910