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Epithelial–mesenchymal transition biomarkers and support vector machine guided model in preoperatively predicting regional lymph node metastasis for rectal cancer
- Source :
- British Journal of Cancer
- Publication Year :
- 2012
- Publisher :
- Nature Publishing Group, 2012.
-
Abstract
- Background: Current imaging modalities are inadequate in preoperatively predicting regional lymph node metastasis (RLNM) status in rectal cancer (RC). Here, we designed support vector machine (SVM) model to address this issue by integrating epithelial–mesenchymal-transition (EMT)-related biomarkers along with clinicopathological variables. Methods: Using tissue microarrays and immunohistochemistry, the EMT-related biomarkers expression was measured in 193 RC patients. Of which, 74 patients were assigned to the training set to select the robust variables for designing SVM model. The SVM model predictive value was validated in the testing set (119 patients). Results: In training set, eight variables, including six EMT-related biomarkers and two clinicopathological variables, were selected to devise SVM model. In testing set, we identified 63 patients with high risk to RLNM and 56 patients with low risk. The sensitivity, specificity and overall accuracy of SVM in predicting RLNM were 68.3%, 81.1% and 72.3%, respectively. Importantly, multivariate logistic regression analysis showed that SVM model was indeed an independent predictor of RLNM status (odds ratio, 11.536; 95% confidence interval, 4.113–32.361; P
- Subjects :
- Oncology
Adult
Male
Cancer Research
medicine.medical_specialty
Pathology
Lymphatic metastasis
Epithelial-Mesenchymal Transition
Support Vector Machine
Adolescent
Colorectal cancer
SVM
information science
colorectal cancer
Young Adult
Predictive Value of Tests
Risk Factors
Internal medicine
Regional lymph node metastasis
Area under curve
medicine
Biomarkers, Tumor
Humans
Epithelial–mesenchymal transition
Aged
Neoplasm Staging
Aged, 80 and over
business.industry
regional lymph node metastasis
Rectal Neoplasms
EMT
Middle Aged
medicine.disease
Prognosis
Immunohistochemistry
Support vector machine
ROC Curve
Tissue Array Analysis
Area Under Curve
Lymphatic Metastasis
Clinical Study
Neoplasm staging
Female
business
Subjects
Details
- Language :
- English
- ISSN :
- 15321827 and 00070920
- Volume :
- 106
- Issue :
- 11
- Database :
- OpenAIRE
- Journal :
- British Journal of Cancer
- Accession number :
- edsair.doi.dedup.....4a9c8cfcc9d33ed98b59b3437608d3d6