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Isolation, characterization, and crossâamplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)
- Source :
- Applications in Plant Sciences, Vol 7, Iss 8, Pp n/a-n/a (2019), Applications in Plant Sciences 7 (2019): e11283. doi:10.1002/aps3.11283, info:cnr-pdr/source/autori:Delnevo, Nicola; Piotti, Andrea; van Etten, Eddie J.; Stock, William D.; Byrne, Margaret/titolo:Isolation, characterization, and cross-amplification of 20 microsatellite markers for Conospermum undulatum (Proteaceae)/doi:10.1002%2Faps3.11283/rivista:Applications in Plant Sciences/anno:2019/pagina_da:e11283/pagina_a:/intervallo_pagine:e11283/volume:7, Applications in Plant Sciences
- Publication Year :
- 2019
- Publisher :
- Wiley, 2019.
-
Abstract
- Premise Recent habitat fragmentation is posing a risk to the wavy-leaved smokebush, Conospermum undulatum (Proteaceae), a rare plant species endemic to southwestern Western Australia. Microsatellite markers are required to characterize the genetic diversity and structure of the species for conservation purposes and to facilitate ecological studies. Methods and results Illumina MiSeq high-throughput sequencing was used to develop 20 novel microsatellite markers for C. undulatum. Polymorphism at each locus was assessed using 72 individuals from three natural populations. Nineteen markers were polymorphic, with the number of alleles per locus ranging from two to 21, and observed and expected heterozygosity ranging from 0.000 to 1.000 and 0.117 to 0.919, respectively. All markers successfully amplified in three congeneric species (C. stoechadis, C. canaliculatum and C. triplinervium). Conclusions The microsatellite markers will be useful for revealing patterns of genetic diversity, dispersal dynamics, and hybridization events for C. undulatum to inform future conservation efforts.
- Subjects :
- 0106 biological sciences
0301 basic medicine
microsatellite primers
Locus (genetics)
Plant Science
Biology
010603 evolutionary biology
01 natural sciences
Proteaceae
Loss of heterozygosity
03 medical and health sciences
Primer Notes
lcsh:Botany
Allele
hybridization
lcsh:QH301-705.5
Conospermum undulatum
Ecology, Evolution, Behavior and Systematics
Genetic diversity
Australia
conservation
Primer Note
biology.organism_classification
lcsh:QK1-989
030104 developmental biology
lcsh:Biology (General)
Evolutionary biology
Conospermum
Biological dispersal
Microsatellite
Subjects
Details
- ISSN :
- 21680450
- Volume :
- 7
- Database :
- OpenAIRE
- Journal :
- Applications in Plant Sciences
- Accession number :
- edsair.doi.dedup.....47c64685b127ad90262a4a45e7d12918