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Ab Initio Molecular Dynamics Simulations and g-Tensor Calculations of Aqueous Benzosemiquinone Radical Anion: Effects of Regular and 'T-Stacked' Hydrogen Bonds

Authors :
James R. Asher
Martin Kaupp
Nikos L. Doltsinis
Source :
Journal of the American Chemical Society. 126:9854-9861
Publication Year :
2004
Publisher :
American Chemical Society (ACS), 2004.

Abstract

Car-Parrinello molecular dynamics (CP-MD) simulations of the benzosemiquinone radical anion in aqueous solution have been performed at ambient conditions. Analysis of the trajectory shows not only extensive hydrogen bonding to the carbonyl oxygen atoms (ca. 4-5.6 water molecules depending on distance criteria), but also relatively long-lived "T-stacked" hydrogen bonds to the semiquinone pi-system. These results are discussed in the context of recent findings on semiquinone-protein interactions in photosynthetic reaction centers, and of EPR and vibration spectroscopical data for the aqueous system. Snapshots from the CP-MD trajectory are used for the first quantum chemical analyses of dynamical effects on electronic g-tensors, using cluster models and a recently developed density functional method. In particular, the effects of intermolecular hydrogen-bond dynamics on the g-tensor components are examined, in comparison with recent EPR and ENDOR studies.

Details

ISSN :
15205126 and 00027863
Volume :
126
Database :
OpenAIRE
Journal :
Journal of the American Chemical Society
Accession number :
edsair.doi.dedup.....46e5adbe97464c8f0dbdab31390bd037
Full Text :
https://doi.org/10.1021/ja0485053