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Genomic and epidemiological monitoring of yellow fever virus transmission potential

Authors :
Marcos Cesar Lima de Mendonça
Maira Alves Pereira
Mariana Sequetin Cunha
Mariane Talon de Menezes
Ester Cerdeira Sabino
Deise Aparecida dos Santos
Giliane de Souza Trindade
Juliana Silva Nogueira
Felipe Campos de Melo Iani
Rodrigo Dias de Oliveira Carvalho
Guy Baele
Erna Geessien Kroon
Talita Émile Ribeiro Adelino
Alexandre Otavio Chieppe
Betânia Paiva Drumond
Simon Dellicour
Maria Angelica Mares Guia
Nuno R. Faria
Kuiama Lewandowski
Izabela Maurício de Rezende
Ludmila Ferraz de Santana
William Wint
Ricardo Gadelha de Abreu
Julien Thézé
André Luis de Abreu
Jaqueline Goes de Jesus
Tetyana I. Vasylyeva
Vagner Fonseca
Shirley Vasconcelos Komninakis
Marcos Vieira Silva
Carlos Frederico Campelo de Albuquerque
Renato S. Aguiar
Miles W. Carroll
Sarah C. Hill
Freya M Shearer
Paola P. Silveira
D. Yi
Moritz U. G. Kraemer
Luiz Carlos Junior Alcantara
Joshua Quick
Vasco Azevedo
L. du Plessis
Érica Munhoz de Mello
T. de Oliveira
Philippe Lemey
Carolina Cardoso dos Santos
Daniel J. Weiss
José Lourenço
Leandro Abade
Patrícia Carvalho de Sequeira
Oliver G. Pybus
Lívia Sacchetto
Rita Maria Ribeiro Nogueira
Osnei Okumoto
Rodrigo Fabiano do Carmo Said
Monica B. Arruda
Ana Maria Bispo de Filippis
Poliana de Oliveira Figueiredo
Uri Obolski
Iray Maria Rocco
Chieh-Hsi Wu
Eliane Saraiva Machado de Araújo
Rodrigo Brindeiro
Renato Pereira de Souza
Birgit Nikolay
Marta Giovanetti
Simon Cauchemez
Nicholas J. Loman
Mariana Gontijo de Brito
Sebastian Funk
Steven T. Pullan
Cintia Damasceno dos Santos Rodrigues
Joilson Xavier
Gavin Pereira
A. C. da Costa
Marcio Henrique de Oliveira Garcia
Amilcar Tanuri
Marc A. Suchard
Fabiana Cristina Pereira dos Santos
Marcela Lencine Ferraz
Marluce Aparecida Assunção Oliveira
University of Oxford
Laboratório de Biologia Molecular de Flavivírus [Rio de Janeiro]
Instituto Oswaldo Cruz / Oswaldo Cruz Institute [Rio de Janeiro] (IOC)
Fundação Oswaldo Cruz / Oswaldo Cruz Foundation (FIOCRUZ)
Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP)-Fundação Oswaldo Cruz / Oswaldo Cruz Foundation (FIOCRUZ)
Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP)
Universidade Federal do Rio de Janeiro (UFRJ)
Rega Institute for Medical Research [Leuven, België]
Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven)
London School of Hygiene and Tropical Medicine (LSHTM)
Modélisation mathématique des maladies infectieuses - Mathematical modelling of Infectious Diseases
Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)
Centre de Bioinformatique, Biostatistique et Biologie Intégrative (C3BI)
Universidade Federal de Minas Gerais [Belo Horizonte] (UFMG)
University of Oxford [Oxford]
Fundação Oswaldo Cruz (FIOCRUZ)
Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP)-Fundação Oswaldo Cruz (FIOCRUZ)
Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)
Source :
Science, Science, 2018, 361 (6405), pp.894-899. ⟨10.1126/science.aat7115⟩, Science, American Association for the Advancement of Science, 2018, 361 (6405), pp.894-899. ⟨10.1126/science.aat7115⟩, Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual), Universidade de São Paulo (USP), instacron:USP, Science (New York, N.Y.), vol 361, iss 6405, Science, 361 (6405
Publication Year :
2018
Publisher :
American Association for the Advancement of Science, 2018.

Abstract

The yellow fever virus (YFV) epidemic in Brazil is the largest in decades. The recent discovery of YFV in Brazilian Aedes species mosquitos highlights a need to monitor the risk of reestablishment of urban YFV transmission in the Americas. We use a suite of epidemiological, spatial, and genomic approaches to characterize YFV transmission. We show that the age and sex distribution of human cases is characteristic of sylvatic transmission. Analysis of YFV cases combined with genomes generated locally reveals an early phase of sylvatic YFV transmission and spatial expansion toward previously YFV-free areas, followed by a rise in viral spillover to humans in late 2016. Our results establish a framework for monitoring YFV transmission in real time that will contribute to a global strategy to eliminate future YFV epidemics.<br />info:eu-repo/semantics/published

Details

Language :
English
ISSN :
00368075 and 10959203
Database :
OpenAIRE
Journal :
Science, Science, 2018, 361 (6405), pp.894-899. ⟨10.1126/science.aat7115⟩, Science, American Association for the Advancement of Science, 2018, 361 (6405), pp.894-899. ⟨10.1126/science.aat7115⟩, Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual), Universidade de São Paulo (USP), instacron:USP, Science (New York, N.Y.), vol 361, iss 6405, Science, 361 (6405
Accession number :
edsair.doi.dedup.....46c92ba1efe4bb31ed3efd110e0e31a4