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Comprehensive Analysis of an Individualized Immune-Related lncRNA Pair Signature in Gastric Cancer

Authors :
Chuang Nie
Jiabao Zhai
Qi Wang
Xiaojie Zhu
Guanghui Xiang
Chang Liu
Tianyu Liu
Wanyu Wang
Yimin Wang
Yashuang Zhao
Wenjing Tian
Yingwei Xue
Haibo Zhou
Source :
Frontiers in cell and developmental biology. 10
Publication Year :
2021

Abstract

Long noncoding RNAs (lncRNAs) have diverse functions, including immune regulation. Increasing studies have reported immune-related lncRNAs in the prognosis of multiple cancers. In this study, we developed an individualized signature containing 13 immune-related lncRNA pairs (IRLPs) which could predict the overall survival, disease-free survival, progression-free survival, and disease-specific survival of gastric cancer (GC) patients in The Cancer Genome Atlas (TCGA) cohort, and internal and external validations, signature comparisons, and subgroup analyses further confirmed its superiority, stability, and generalizability. Notably, this signature also showed good applicability in discriminating the prognosis of pan-cancer patients. Then, we constructed and validated a nomogram for overall survival based on the signature and clinical factors, which allowed more accurate predictions of GC prognosis. In addition, we revealed that the low survival rate of patients with high-risk scores may be due to their aggressive clinical features, enriched cancer-related signaling pathways, the infiltration of specific immunosuppressive cells, and low tumor mutation burden. We further predicted obviously worse immunotherapeutic responses in the high-risk groups and identified some candidate compounds targeting GC risk group differentiation. This signature based on the IRLPs may be promising for predicting the survival outcomes and immunotherapeutic responses of GC patients in clinical practice.

Subjects

Subjects :
Cell Biology
Developmental Biology

Details

ISSN :
2296634X
Volume :
10
Database :
OpenAIRE
Journal :
Frontiers in cell and developmental biology
Accession number :
edsair.doi.dedup.....45a80321ab22d2a6590e8b2ac6cf1d8f