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Sulfurovum riftiae sp. nov., a mesophilic, thiosulfate-oxidizing, nitrate-reducing chemolithoautotrophic epsilonproteobacterium isolated from the tube of the deep-sea hydrothermal vent polychaete Riftia pachyptila
- Source :
- International journal of systematic and evolutionary microbiology, 66 (2016): 2697–2701. doi:10.1099/ijsem.0.001106, info:cnr-pdr/source/autori:Giovannelli D.; Chung M.; Staley J.; Starovoytov V.; Bris N.L.; Vetriani C./titolo:Sulfurovum riftiae sp. nov., a mesophilic, thiosulfate-oxidizing, nitrate-reducing chemolithoautotrophic epsilonproteobacterium isolated from the tube of the deep-sea hydrothermal vent polychaete Riftia pachyptila/doi:10.1099%2Fijsem.0.001106/rivista:International journal of systematic and evolutionary microbiology (Print)/anno:2016/pagina_da:2697/pagina_a:2701/intervallo_pagine:2697–2701/volume:66
- Publication Year :
- 2016
-
Abstract
- An anaerobic, nitrate-reducing, sulfur- and thiosulfate-oxidizing bacterium, designated strain 1812E(T), was isolated from the vent polychaete Riftia pachyptila, which was collected from a deep-sea hydrothermal vent on the East Pacific Rise. Cells were Gram-stain-negative rods, measuring approximately 1.05 +/- 0.11 mu m by 0.40 +/- 0.05 mu m. Strain 1812E(T) grew at 25 - - 45 degrees C (optimum 35 degrees C), with 1.5-4.0% (w/v) NaCI (optimum 3.0%) and at pH 5.0-8.0 (optimum pH 6.0). The generation time under optimal conditions was 3 h. Strain 1812E(T) was an anaerobic chemolithotroph that grew with either sulfur or thiosulfate as the energy source and carbon dioxide as the sole carbon source. Nitrate was used as a sole terminal electron acceptor. The predominant fatty acids were C-16:1 omega 7c(1) C-18:1 omega 7c and C-16:0. The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. The major respiratory quinone was menaquinone MK-6 and the G+C content of the genomic DNA was 47.4 mol%. Phylogenetic analysis of the 16S rRNA gene of strain 1812E(T) showed that the isolate belonged to the Epsilon proteobacteria, and its closest relatives were Sulfurovum lithotrophicum 42BK(T) and Sulfurovum aggregans Monchim 33(T) (98.3 and 95.7% sequence similarity, respectively). DNA DNA relatedness between strain 1812E(T) and the type strain of S. lithotrophicum was 29.7%, demonstrating that the two strains are not members of the same species. Based on the phylogenetic, molecular, chemotaxonomic and physiological evidence, strain 1812E(T) represents a novel species within the genus Sulfurovum, for which the name Sulfurovum riftiae sp. nov. is proposed. The type strain is 1812E(T) (=DSM 101780(T)=JCM 30810(T))
- Subjects :
- 0301 basic medicine
Nitrate
Sulfurovum
chemistry.chemical_compound
Thiosulfate
RNA, Ribosomal, 16S
Phospholipids
Phylogeny
Base Composition
Strain (chemistry)
Fatty Acids
Vitamin K 2
General Medicine
East Pacific Rise
Bacterial Typing Techniques
Phospholipid
Energy source
Oxidation-Reduction
Hydrothermal vent
DNA, Bacterial
EPSILON-PROTEOBACTERIA
RENATURATION RATES
SEQUENCE ALIGNMENT
DNA HYBRIDIZATION
LIPID-COMPOSITION
GEN. NOV
BACTERIUM
COLONIZATION
TOOLS
030106 microbiology
Thiosulfates
chemistry.chemical_element
Biology
Microbiology
03 medical and health sciences
Hydrothermal Vents
Bacterial Typing Technique
Botany
Animals
Seawater
Ecology, Evolution, Behavior and Systematics
Nitrates
Epsilonproteobacteria
Animal
Polychaeta
sulfur oxidation
Sequence Analysis, DNA
16S ribosomal RNA
biology.organism_classification
Sulfur
nitrate reduction
030104 developmental biology
chemistry
deep-sea hydrothermal vent
Hydrothermal Vent
Bacteria
Fatty Acid
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- International journal of systematic and evolutionary microbiology, 66 (2016): 2697–2701. doi:10.1099/ijsem.0.001106, info:cnr-pdr/source/autori:Giovannelli D.; Chung M.; Staley J.; Starovoytov V.; Bris N.L.; Vetriani C./titolo:Sulfurovum riftiae sp. nov., a mesophilic, thiosulfate-oxidizing, nitrate-reducing chemolithoautotrophic epsilonproteobacterium isolated from the tube of the deep-sea hydrothermal vent polychaete Riftia pachyptila/doi:10.1099%2Fijsem.0.001106/rivista:International journal of systematic and evolutionary microbiology (Print)/anno:2016/pagina_da:2697/pagina_a:2701/intervallo_pagine:2697–2701/volume:66
- Accession number :
- edsair.doi.dedup.....44741cc62876fa18eab2b70527ffe72e