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Expansion and diversification of the signaling capabilities of the CD2/SLAM family in Xenopodinae amphibians
- Source :
- Immunogenetics. 63(10)
- Publication Year :
- 2010
-
Abstract
- We studied the evolution of the CD2 family in tetrapods by extracting and analyzing CD2-like genes from the genome of the amphibian species Silurana (Xenopus) tropicalis. An exhaustive analysis of the genomic and cDNA databases resulted in the identification of at least 70 CD2-like genes. The predicted receptors mostly maintain the typical VC2 ectodomains, but are highly diverse in their C-termini, which suggests a broad range of signaling capacities. Apart from the presumed monomeric receptors with ITSM and/or ITIM motifs, the Silurana family includes secreted proteins. Furthermore, a fraction of the receptors contain a conserved TM subtype with the NxxR motif that is known to promote an association with the FcRγ subunit and that was previously found in the members of the FcR- and KIR-related receptors. The expression analysis of a sample of the genes showed broad tissue distribution and gene-specific expression patterns. Phylogenetic analysis predicted that the CD58, CD150/SLAM, and SLAMF8 genes were maintained as single-copy genes in both mammals and amphibians, while others expanded/contracted in a lineage-specific manner.
- Subjects :
- Genetics
biology
Phylogenetic tree
Xenopus
Immunology
Molecular Sequence Data
CD2 Antigens
Receptors, Cell Surface
biology.organism_classification
Genome
Evolution, Molecular
Signaling Lymphocytic Activation Molecule Family Member 1
Phylogenetics
Antigens, CD
Complementary DNA
Animals
Amino Acid Sequence
Receptor
Gene
Sequence Alignment
Phylogeny
Silurana
Signal Transduction
Subjects
Details
- ISSN :
- 14321211
- Volume :
- 63
- Issue :
- 10
- Database :
- OpenAIRE
- Journal :
- Immunogenetics
- Accession number :
- edsair.doi.dedup.....43c6fd6c53fac88a62fe1187da804721