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Isolation of SSR markers for two African tropical tree species, Erythrophleum suaveolens and E. ivorense (Caesalpinioideae)
- Source :
- Repositorio de Resultados de Investigación del INIA, INIA: Repositorio de Resultados de Investigación del INIA, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria INIA, American journal of botany (2011)., info:cnr-pdr/source/autori:J. Duminil, G.K. Koffi, G. Debout, F. Sebastiani, G.G. Vendramin, M. Heuertz, S.C. González-Martínez, O.J. Hardy/titolo:Isolation of SSR markers for two African tropical tree species Erythrophleum suaveolens and E. ivorense (Caesalpinioideae)./doi:/rivista:American journal of botany/anno:2011/pagina_da:/pagina_a:/intervallo_pagine:/volume, American Journal of Botany, American Journal of Botany, Botanical Society of America, 2011, 98 (5), pp.e106-e108. ⟨10.3732/ajb.1000482⟩
- Publication Year :
- 2011
-
Abstract
- Premise of the study To characterize the level of genetic diversity and gene flow, as well as to identify unambiguously two African tropical tree species, Erythrophleum ivorense and E. suaveolens, we have developed a set of nuclear SSR (Simple Sequence Repeats) markers. Methods and Results Nine SSRs that display polymorphism in both species were identified. The nine newly developed SSR markers can be amplified in only two multiplexed reactions. Levels of polymorphism were assessed in two populations per species, yielding two to fifteen alleles per locus in E. ivorense and three to sixteen alleles per locus in E. suaveolens. Conclusions The SSR markers developed here are promising to study the spatial distribution of genetic diversity and the genetic delimitation of two Erythrophleum species from central Africa. © 2011 Botanical Society of America.
- Subjects :
- 0106 biological sciences
Gene Flow
Genetic Markers
DNA, Plant
[SDV]Life Sciences [q-bio]
Molecular Sequence Data
Locus (genetics)
Spatial genetic structure
Plant Science
010603 evolutionary biology
01 natural sciences
Polymerase Chain Reaction
Genetic diversity
Gene flow
03 medical and health sciences
Species Specificity
Genetics
Allele
Caesalpinioideae
Ecology, Evolution, Behavior and Systematics
Species identification
Africa South of the Sahara
030304 developmental biology
DNA Primers
Cell Nucleus
0303 health sciences
Polymorphism, Genetic
biology
Erythrophleum
gene fl ow
genetic diversity
species identifi cation
spatial genetic structure
tropics
Tropics
Genetic Variation
food and beverages
Fabaceae
biology.organism_classification
Erythrophleum suaveolens
Microsatellite
Microsatellite Repeats
Subjects
Details
- ISSN :
- 00029122
- Database :
- OpenAIRE
- Journal :
- Repositorio de Resultados de Investigación del INIA, INIA: Repositorio de Resultados de Investigación del INIA, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria INIA, American journal of botany (2011)., info:cnr-pdr/source/autori:J. Duminil, G.K. Koffi, G. Debout, F. Sebastiani, G.G. Vendramin, M. Heuertz, S.C. González-Martínez, O.J. Hardy/titolo:Isolation of SSR markers for two African tropical tree species Erythrophleum suaveolens and E. ivorense (Caesalpinioideae)./doi:/rivista:American journal of botany/anno:2011/pagina_da:/pagina_a:/intervallo_pagine:/volume, American Journal of Botany, American Journal of Botany, Botanical Society of America, 2011, 98 (5), pp.e106-e108. ⟨10.3732/ajb.1000482⟩
- Accession number :
- edsair.doi.dedup.....43934861aa63deec6a494fc784c5d7e0
- Full Text :
- https://doi.org/10.3732/ajb.1000482⟩