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The complex genetic landscape of familial MDS and AML reveals pathogenic germline variants

Authors :
Aline Renneville
Judith C. W. Marsh
Carolyn Owen
Andrew Green
Rogier Mous
Jude Fitzgibbon
Andrew R. Hallahan
David Taussig
Jun Wang
Josep F. Nomdedeu
Ahad F. Al Seraihi
Mark Layton
Nikolas Pontikos
Doris Steinemann
Kim Reay
Vincent Plagnol
Rachel Protheroe
Tim Ripperger
Susanna Akiki
Joanne Mason
Upal Hossain
Henrik Hjorth-Hansen
Anne Uyttebroeck
Amanda J. Walne
Nigel H. Russell
Jenna Alnajar
Nele Hug
Claude Preudhomme
Jamie Cavenagh
Findlay Bewicke-Copley
Csaba Bödör
Kiran Tawana
Adrian Bloor
Cynthia L. Toze
Alicia Ellison
Paula Page
Gabriela Sciuccati
Inderjeet Dokal
Tom Vulliamy
John K. Wu
Jiri Pavlu
Peter Vandenberghe
Hemanth Tummala
Elspeth Payne
Michael L. Barnett
David T. Bowen
Brigitte Schlegelberger
Priyanka Mehta
Ana Rio-Machin
Alison Male
Shirleny Cardoso
Hannah Armes
Anand Saggar
Sarah Lawson
Nuria Pujol-Moix
Javier F. Cáceres
Pierre Fenaux
Sally Killick
Source :
Nature Communications, r-IIB SANT PAU: Repositorio Institucional de Producción Científica del Instituto de Investigación Biomédica Sant Pau, Institut d’Investigació Biomèdica Sant Pau (IIB Sant Pau), Dipòsit Digital de Documents de la UAB, Universitat Autònoma de Barcelona, Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020), Rio-machin, A, Vulliamy, T, Hug, N, Walne, A, Tawana, K, Cardoso, S, Ellison, A, Pontikos, N, Wang, J, Tummala, H, Al Seraihi, A F, Alnajar, J, Bewicke-Copley, F, Armes, H, Barnett, M, Bloor, A, Bodor, C, Bowen, D, Fenaux, P, Green, A, Hallahan, A, Hjorth-Hansen, H, Hossain, U, Killick, S, Lawson, S, Layton, M, Male, A M, Marsh, J, Mehta, P, Mous, R, Nomdedeu, J F, Owen, C, Pavlu, J, Payne, E, Protheroe, R, Predhomme, C, Pujol-Moix, N, Renneville, A, Russell, N, Saggar, A, Sciuccati, G, Taussig, D, Toze, C, Uyttebroeck, A, Vandenberghe, P, Schlegelberger, B, Ripperger, T, Steinemann, D, Wu, J, Mason, J, Page, P, El Akiki, S, Reay, K, Cavenagh, J D, Plagnol, V, Caceres, J F, Fitzgibbon, J & Dokal, I 2020, ' The complex genetic landscape of familial MDS and AML reveals pathogenic germline variants ', Nature Communications . https://doi.org/10.1038/s41467-020-14829-5, r-IIB SANT PAU. Repositorio Institucional de Producción Científica del Instituto de Investigación Biomédica Sant Pau, instname
Publication Year :
2020
Publisher :
NATURE PORTFOLIO, 2020.

Abstract

The inclusion of familial myeloid malignancies as a separate disease entity in the revised WHO classification has renewed efforts to improve the recognition and management of this group of at risk individuals. Here we report a cohort of 86 acute myeloid leukemia (AML) and myelodysplastic syndrome (MDS) families with 49 harboring germline variants in 16 previously defined loci (57%). Whole exome sequencing in a further 37 uncharacterized families (43%) allowed us to rationalize 65 new candidate loci, including genes mutated in rare hematological syndromes (ADA, GP6, IL17RA, PRF1 and SEC23B), reported in prior MDS/AML or inherited bone marrow failure series (DNAH9, NAPRT1 and SH2B3) or variants at novel loci (DHX34) that appear specific to inherited forms of myeloid malignancies. Altogether, our series of MDS/AML families offer novel insights into the etiology of myeloid malignancies and provide a framework to prioritize variants for inclusion into routine diagnostics and patient management.<br />Familial myeloid malignancies have recently been classified as separate disease entities. Here, using whole-exome sequencing of affected pedigrees - the authors highlight genetic variants associated with these conditions.

Details

Language :
English
ISSN :
20411723
Database :
OpenAIRE
Journal :
Nature Communications, r-IIB SANT PAU: Repositorio Institucional de Producción Científica del Instituto de Investigación Biomédica Sant Pau, Institut d’Investigació Biomèdica Sant Pau (IIB Sant Pau), Dipòsit Digital de Documents de la UAB, Universitat Autònoma de Barcelona, Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020), Rio-machin, A, Vulliamy, T, Hug, N, Walne, A, Tawana, K, Cardoso, S, Ellison, A, Pontikos, N, Wang, J, Tummala, H, Al Seraihi, A F, Alnajar, J, Bewicke-Copley, F, Armes, H, Barnett, M, Bloor, A, Bodor, C, Bowen, D, Fenaux, P, Green, A, Hallahan, A, Hjorth-Hansen, H, Hossain, U, Killick, S, Lawson, S, Layton, M, Male, A M, Marsh, J, Mehta, P, Mous, R, Nomdedeu, J F, Owen, C, Pavlu, J, Payne, E, Protheroe, R, Predhomme, C, Pujol-Moix, N, Renneville, A, Russell, N, Saggar, A, Sciuccati, G, Taussig, D, Toze, C, Uyttebroeck, A, Vandenberghe, P, Schlegelberger, B, Ripperger, T, Steinemann, D, Wu, J, Mason, J, Page, P, El Akiki, S, Reay, K, Cavenagh, J D, Plagnol, V, Caceres, J F, Fitzgibbon, J & Dokal, I 2020, ' The complex genetic landscape of familial MDS and AML reveals pathogenic germline variants ', Nature Communications . https://doi.org/10.1038/s41467-020-14829-5, r-IIB SANT PAU. Repositorio Institucional de Producción Científica del Instituto de Investigación Biomédica Sant Pau, instname
Accession number :
edsair.doi.dedup.....43441adab8bb9b0f13c4acc683573c5e