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Multi-Targeting Bioactive Compounds Extracted from Essential Oils as Kinase Inhibitors
- Source :
- Molecules, Molecules, Vol 25, Iss 2174, p 2174 (2020), Volume 25, Issue 9
- Publication Year :
- 2020
-
Abstract
- Essential oils (EOs) are popular in aromatherapy, a branch of alternative medicine that claims their curative effects. Moreover, several studies reported EOs as potential anti-cancer agents by inducing apoptosis in different cancer cell models. In this study, we have considered EOs as a potential resource of new kinase inhibitors with a polypharmacological profile. On the other hand, computational methods offer the possibility to predict the theoretical activity profile of ligands, discovering dangerous off-targets and/or synergistic effects due to the potential multi-target action. With this aim, we performed a Structure-Based Virtual Screening (SBVS) against X-ray models of several protein kinases selected from the Protein Data Bank (PDB) by using a chemoinformatics database of EOs. By evaluating theoretical binding affinity, 13 molecules were detected among EOs as new potential kinase inhibitors with a multi-target profile. The two compounds with higher percentages in the EOs were studied more in depth by means Induced Fit Docking (IFD) protocol, in order to better predict their binding modes taking into account also structural changes in the receptor. Finally, given its good binding affinity towards five different kinases, cinnamyl cinnamate was biologically tested on different cell lines with the aim to verify the antiproliferative activity. Thus, this work represents a starting point for the optimization of the most promising EOs structure as kinase inhibitors with multi-target features.
- Subjects :
- Protein Data Bank (RCSB PDB)
Pharmaceutical Science
Ligands
Analytical Chemistry
0302 clinical medicine
Drug Discovery
anti-cancer
Multi targeting
0303 health sciences
Chemistry
Kinase
computer.file_format
Protein-Tyrosine Kinases
SBVS
ErbB Receptors
Molecular Docking Simulation
kinases
Chemistry (miscellaneous)
Cheminformatics
030220 oncology & carcinogenesis
Molecular Medicine
Proto-Oncogene Proteins B-raf
Cell Survival
kinase
Antineoplastic Agents
Computational biology
Article
essential oil
lcsh:QD241-441
Structure-Activity Relationship
03 medical and health sciences
lcsh:Organic chemistry
Cell Line, Tumor
Oils, Volatile
Humans
Physical and Theoretical Chemistry
essential oils
Protein Kinase Inhibitors
030304 developmental biology
Virtual screening
Activity profile
polypharmacology
multi-target
Organic Chemistry
Pyruvate Dehydrogenase Acetyl-Transferring Kinase
Receptor Protein-Tyrosine Kinases
Protein Data Bank
Cinnamates
Docking (molecular)
Protein Kinases
computer
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- Molecules, Molecules, Vol 25, Iss 2174, p 2174 (2020), Volume 25, Issue 9
- Accession number :
- edsair.doi.dedup.....41d616a9e0449750e4bad0bb11daf616