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First transcriptome assembly of a newly discovered vent mussel, Gigantidas vrijenhoeki, at Onnuri Vent Field on the northern Central Indian Ridge
- Source :
- Marine Genomics. 57:100819
- Publication Year :
- 2021
- Publisher :
- Elsevier BV, 2021.
-
Abstract
- This is the first report of a transcriptome assembly of a newly discovered hydrothermal vent mussel, Gigantidas vrijenhoeki (Bivalvia: Mytilidae), on the Central Indian Ridge. Gigantidas vrijenhoeki was identified from material collected at the newly discovered Onnuri Vent Field (OVF) on the Central Indian Ridge in 2018, and was reported as a new species, distinct from another dominant hydrothermal vent mussel, Bathymodiolus marisindicus, in 2020. We sequenced the transcriptome of G. vrijenhoeki using the Illumina HiSeq X System. De novo assembly and analysis of the coding regions predicted 25,405 genes, 84.76% of which was annotated by public databases. The transcriptome of G. vrijenhoeki will be a valuable resource in studying the ecological and biological characteristics of this new species, which is distinct from other deep-sea mussels. These data should also support the investigation of the relationship between the environmental conditions of hydrothermal vents and the unique distribution of G. vrijenhoeki in the OVF of the Central Indian Ridge.
- Subjects :
- 0106 biological sciences
Sequence assembly
Aquatic Science
010603 evolutionary biology
01 natural sciences
Transcriptome
03 medical and health sciences
Hydrothermal Vents
Genetics
Animals
Indian Ocean
Gigantidas
030304 developmental biology
0303 health sciences
biology
High-Throughput Nucleotide Sequencing
Hydrothermal vent
Sequence Analysis, DNA
Mussel
Gigantidas vrijenhoeki
Bivalvia
biology.organism_classification
Mytilidae
Evolutionary biology
Onnuri Vent Field
Ridge (meteorology)
Subjects
Details
- ISSN :
- 18747787
- Volume :
- 57
- Database :
- OpenAIRE
- Journal :
- Marine Genomics
- Accession number :
- edsair.doi.dedup.....40ef3e8e0b221e6df04f7293cb7548de
- Full Text :
- https://doi.org/10.1016/j.margen.2020.100819