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Considerable escape of SARS-CoV-2 Omicron to antibody neutralization

Authors :
Delphine Planas
Nell Saunders
Piet Maes
Florence Guivel-Benhassine
Cyril Planchais
Julian Buchrieser
William-Henry Bolland
Françoise Porrot
Isabelle Staropoli
Frederic Lemoine
Hélène Péré
David Veyer
Julien Puech
Julien Rodary
Guy Baele
Simon Dellicour
Joren Raymenants
Sarah Gorissen
Caspar Geenen
Bert Vanmechelen
Tony Wawina-Bokalanga
Joan Martí-Carreras
Lize Cuypers
Aymeric Sève
Laurent Hocqueloux
Thierry Prazuck
Félix A. Rey
Etienne Simon-Loriere
Timothée Bruel
Hugo Mouquet
Emmanuel André
Olivier Schwartz
Virus et Immunité - Virus and immunity (CNRS-UMR3569)
Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité)
Vaccine Research Institute [Créteil, France] (VRI)
Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)
École Doctorale Bio Sorbonne Paris Cité [Paris] (ED562 - BioSPC)
Université Sorbonne Paris Cité (USPC)-Université Paris Cité (UPCité)
Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven)
Immunologie humorale - Humoral Immunology
Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)
Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB
Institut Pasteur [Paris] (IP)-Université Paris Cité (UPCité)
Hôpital Européen Georges Pompidou [APHP] (HEGP)
Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Hôpitaux Universitaires Paris Ouest - Hôpitaux Universitaires Île de France Ouest (HUPO)
Génomique fonctionnelle des tumeurs solides = Functional Genomics of Solid Tumors [CRC] (FunGeST)
Centre de Recherche des Cordeliers (CRC (UMR_S_1138 / U1138))
École Pratique des Hautes Études (EPHE)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université Paris Cité (UPCité)-École Pratique des Hautes Études (EPHE)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université Paris Cité (UPCité)
Université libre de Bruxelles (ULB)
University Hospitals Leuven [Leuven]
Centre Hospitalier Régional d'Orléans (CHRO)
Virologie Structurale - Structural Virology
Génomique évolutive des virus à ARN - Evolutionary genomics of RNA viruses
The Opera system was co-funded by Institut Pasteur and the Région ile de France (DIM1Health). Work in the O.S. laboratory is funded by Institut Pasteur, Urgence COVID-19 Fundraising Campaign of Institut Pasteur, Fondation pour la Recherche Médicale (FRM), ANRS, the Vaccine Research Institute (ANR-10-LABX-77), Labex IBEID (ANR-10-LABX-62-IBEID), ANR/FRM Flash Covid PROTEO-SARS-CoV-2 and IDISCOVR. Work in the UPBI is funded by grant ANR-10-INSB-04-01 and Région Ile-de-France program DIM1-Health. D.P. is supported by the Vaccine Research Institute. The H.M. laboratory is funded by the Institut Pasteur, the Milieu Intérieur Program (ANR-10-LABX-69-01), the INSERM, REACTing, EU (RECOVER) and Fondation de France (00106077) grants. The E.S.-L. laboratory is funded by Institut Pasteur, the INCEPTION program (Investissements d’Avenir grant ANR-16-CONV-0005) and the French Government’s Investissement d’Avenir programme, Laboratoire d’Excellence ‘Integrative Biology of Emerging Infectious Diseases’ (grant no. ANR-10-LABX-62-IBEID). G.B. acknowledges support from the Internal Funds KU Leuven under grant agreement C14/18/094, and the Research Foundation–Flanders (Fonds voor Wetenschappelijk Onderzoek–Vlaanderen, G0E1420N, G098321N). P.M. acknowledges support from a COVID-19 research grant of ‘Fonds Wetenschappelijk Onderzoek’/Research Foundation–Flanders (grant no. G0H4420N). S.D. is supported by the Fonds National de la Recherche Scientifique (FNRS, Belgium) and also acknowledges support from the Research Foundation–Flanders (Fonds voor Wetenschappelijk Onderzoek–Vlaanderen, G098321N) and from the European Union Horizon 2020 project MOOD (grant no. 874850).
ANR-10-LABX-0077,VRI,Initiative for the creation of a Vaccine Research Institute(2010)
ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010)
ANR-20-COVI-0059,PROTEO-SARS-CoV-2,Protéomique du SARS-CoV-2(2020)
ANR-10-INBS-0004,France-BioImaging,Développment d'une infrastructure française distribuée coordonnée(2010)
ANR-10-LABX-0069,MILIEU INTERIEUR,GENETIC & ENVIRONMENTAL CONTROL OF IMMUNE PHENOTYPE VARIANCE: ESTABLISHING A PATH TOWARDS PERSONALIZED MEDICINE(2010)
ANR-16-CONV-0005,INCEPTION,Institut Convergences pour l'étude de l'Emergence des Pathologies au Travers des Individus et des populatiONs(2016)
European Project: 874850,H2020-SC1-2019-Single-Stage-RTD,MOOD(2020)
Virus et Immunité - Virus and immunity
Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité)
Vaccine Research Institute (VRI)
Institut Pasteur [Paris]-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)
Institut Pasteur [Paris]-Université Paris Cité (UPCité)
École pratique des hautes études (EPHE)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU)-Université Paris Cité (UPCité)-École pratique des hautes études (EPHE)
European Project: 874850,MOOD
Source :
Nature, Nature, 2022, 602 (7898), pp.671-675. ⟨10.1038/s41586-021-04389-z⟩, Nature, Nature Publishing Group, 2022, 602 (7898), pp.671-675. ⟨10.1038/s41586-021-04389-z⟩
Publication Year :
2021
Publisher :
Springer Science and Business Media LLC, 2021.

Abstract

The SARS-CoV-2 Omicron variant was first identified in November 2021 in Botswana and South Africa1-3. It has since spread to many countries and is expected to rapidly become dominant worldwide. The lineage is characterized by the presence of around 32 mutations in spike-located mostly in the N-terminal domain and the receptor-binding domain-that may enhance viral fitness and enable antibody evasion. Here we isolated an infectious Omicron virus in Belgium from a traveller returning from Egypt. We examined its sensitivity to nine monoclonal antibodies that have been clinically approved or are in development4, and to antibodies present in 115 serum samples from COVID-19 vaccine recipients or individuals who have recovered from COVID-19. Omicron was completely or partially resistant to neutralization by all monoclonal antibodies tested. Sera from recipients of the Pfizer or AstraZeneca vaccine, sampled five months after complete vaccination, barely inhibited Omicron. Sera from COVID-19-convalescent patients collected 6 or 12 months after symptoms displayed low or no neutralizing activity against Omicron. Administration of a booster Pfizer dose as well as vaccination of previously infected individuals generated an anti-Omicron neutralizing response, with titres 6-fold to 23-fold lower against Omicron compared with those against Delta. Thus, Omicron escapes most therapeutic monoclonal antibodies and, to a large extent, vaccine-elicited antibodies. However, Omicron is neutralized by antibodies generated by a booster vaccine dose. ispartof: NATURE vol:602 issue:7898 pages:671-+ ispartof: location:England status: published

Details

ISSN :
14764687 and 00280836
Database :
OpenAIRE
Journal :
Nature
Accession number :
edsair.doi.dedup.....3f32775e696f14e344c61284cb0faa4f