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Tumor image-derived texture features are associated with CD3 T-cell infiltration status in glioblastoma
- Source :
- Oncotarget
- Publication Year :
- 2017
- Publisher :
- Impact Journals, LLC, 2017.
-
Abstract
- This study analyzed magnetic resonance imaging (MRI) scans of Glioblastoma (GB) patients to develop an imaging-derived predictive model for assessing the extent of intratumoral CD3 T-cell infiltration. Pre-surgical T1-weighted post-contrast and T2-weighted Fluid-Attenuated-Inversion-Recovery (FLAIR) MRI scans, with corresponding mRNA expression of CD3D/E/G were obtained through The Cancer Genome Atlas (TCGA) for 79 GB patients. The tumor region was contoured and 86 image-derived features were extracted across the T1-post contrast and FLAIR images. Six imaging features-kurtosis, contrast, small zone size emphasis, low gray level zone size emphasis, high gray level zone size emphasis, small zone high gray level emphasis-were found associated with CD3 activity and used to build a predictive model for CD3 infiltration in an independent data set of 69 GB patients (using a 50-50 split for training and testing). For the training set, the image-based prediction model for CD3 infiltration achieved accuracy of 97.1% and area under the curve (AUC) of 0.993. For the test set, the model achieved accuracy of 76.5% and AUC of 0.847. This suggests a relationship between image-derived textural features and CD3 T-cell infiltration enabling the non-invasive inference of intratumoral CD3 T-cell infiltration in GB patients, with potential value for the radiological assessment of response to immune therapeutics.
- Subjects :
- CD3
Fluid-attenuated inversion recovery
03 medical and health sciences
0302 clinical medicine
Text mining
immune activity
Medicine
texture analysis
medicine.diagnostic_test
biology
business.industry
T cell infiltration
glioblastoma
Area under the curve
Magnetic resonance imaging
imaging-genomics analysis
medicine.disease
Oncology
030220 oncology & carcinogenesis
biology.protein
business
Nuclear medicine
Infiltration (medical)
030217 neurology & neurosurgery
Research Paper
Glioblastoma
Subjects
Details
- ISSN :
- 19492553
- Volume :
- 8
- Database :
- OpenAIRE
- Journal :
- Oncotarget
- Accession number :
- edsair.doi.dedup.....3e6afdb9c47d88862aed12739311e5b0
- Full Text :
- https://doi.org/10.18632/oncotarget.20643