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The complete chloroplast genome sequence of Panax vietnamensis Ha et Grushv (Araliaceae)

Authors :
Tae-Jin Yang
Sang-Choon Lee
Kyung-Hee Kim
Woojong Jang
Young-Chang Kim
Nam-Hoon Kim
Junki Lee
Binh van Nguyen
Ji Eon Shin
Hong-Il Choi
Source :
Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis. 28(1)
Publication Year :
2015

Abstract

The complete chloroplast genome sequence of Panax vietnamensis, a medicinal herb belonging to Araliaceae family, was generated by de novo assembly using whole genome next-generation sequences. The chloroplast genome was a circular form of 155 992 bp long and showed typical chloroplast genome structure consisting of a large single-copy region of 86 177 bp, a small single copy region of 17 935 bp and a pair of inverted repeats of 25 940 bp. The chloroplast genome had 79 protein-coding genes, 29 tRNA genes and 4 rRNA genes. The phylogenetic analysis with the reported chloroplast genomes revealed that four Panax species were grouped in the same clade and P. vietnamensis is more closely related to P. notoginseng than P. ginseng and P. quinquefolius.

Details

ISSN :
24701408
Volume :
28
Issue :
1
Database :
OpenAIRE
Journal :
Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis
Accession number :
edsair.doi.dedup.....3e38eb20543cf91fe150d7037fce6823