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Reactivation of a developmentally silenced embryonic globin gene

Authors :
Jacqueline A. Sharpe
Megan Buckley
Helena Francis
Jacqueline A. Sloane-Stanley
Siyu Liu
Mira T. Kassouf
Maria C. Suciu
Christian Babbs
Jennifer Eglinton
Stephanie J Carpenter
Stuart H. Orkin
Andrew J. King
Aude-Anais Olijnik
Lars L. P. Hanssen
Danuta M. Jeziorska
Damien J. Downes
Nigel A. Roberts
Jelena Telenius
Robert A. Beagrie
A. Marieke Oudelaar
Peng Hua
Len A. Pennacchio
James O.J. Davies
Duantida Songdej
Douglas R. Higgs
Jim R. Hughes
Source :
Nature Communications, Nature communications, vol 12, iss 1, Nature Communications, Vol 12, Iss 1, Pp 1-15 (2021)
Publication Year :
2020

Abstract

The α- and β-globin loci harbor developmentally expressed genes, which are silenced throughout post-natal life. Reactivation of these genes may offer therapeutic approaches for the hemoglobinopathies, the most common single gene disorders. Here, we address mechanisms regulating the embryonically expressed α-like globin, termed ζ-globin. We show that in embryonic erythroid cells, the ζ-gene lies within a ~65 kb sub-TAD (topologically associating domain) of open, acetylated chromatin and interacts with the α-globin super-enhancer. By contrast, in adult erythroid cells, the ζ-gene is packaged within a small (~10 kb) sub-domain of hypoacetylated, facultative heterochromatin within the acetylated sub-TAD and that it no longer interacts with its enhancers. The ζ-gene can be partially re-activated by acetylation and inhibition of histone de-acetylases. In addition to suggesting therapies for severe α-thalassemia, these findings illustrate the general principles by which reactivation of developmental genes may rescue abnormalities arising from mutations in their adult paralogues.<br />Globin loci harbor genes that are expressed embryonically and silenced postnatally. Here the authors show that zeta-globin silencing depends upon selective hypoacetylation of its TAD subdomain, which blocks its interaction with the alpha-globin super-enhancer, and zeta-globin can be reactivated by acetylation.

Details

ISSN :
20411723
Volume :
12
Issue :
1
Database :
OpenAIRE
Journal :
Nature communications
Accession number :
edsair.doi.dedup.....3c2e55d901b82c1f35bff2076e580a90