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Fast compressive Raman bio-imaging via matrix completion

Authors :
Jonathan Dong
Fernando Soldevila
Enrique Tajahuerce
Sylvain Gigan
Hilton B. de Aguiar
Laboratoire Kastler Brossel (LKB [Collège de France])
École normale supérieure - Paris (ENS Paris)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-Fédération de recherche du Département de physique de l'Ecole Normale Supérieure - ENS Paris (FRDPENS)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Collège de France (CdF (institution))
Laboratoire de Physique Statistique de l'ENS (LPS)
Fédération de recherche du Département de physique de l'Ecole Normale Supérieure - ENS Paris (FRDPENS)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS Paris)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Diderot - Paris 7 (UPD7)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS)
Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS Paris)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS Paris)-Collège de France (CdF)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS Paris)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Paris (ENS Paris)-Université Paris Diderot - Paris 7 (UPD7)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)
Laboratoire de physique de l'ENS - ENS Paris (LPENS (UMR_8023))
Source :
Optica, Optica, 2019, 6, pp.341-346. ⟨10.1364/OPTICA.6.000341⟩, Repositori Universitat Jaume I, Universitat Jaume I
Publication Year :
2018

Abstract

Raman microscopy is a powerful method combining non-invasiveness with no special sample preparation. Because of this remarkable simplicity, it has been widely exploited in many fields, ranging from life and materials sciences to engineering. Notoriously, due to the required imaging speeds for bio-imaging, it has remained a challenge how to use this technique for dynamic and large-scale imaging. Recently, a supervised compressive Raman framework has been put forward, allowing for fast imaging, therefore alleviating the issue of speed. Yet, due to the need for strong a priori information of the species forming the hyperspectrum, it has remained elusive how to apply this supervised method for microspectroscopy of (dynamic) biological tissues. Combining an original spectral under-sampling measurement technique with a matrix completion framework for reconstruction, we demonstrate fast and inexpensive label-free molecular imaging of biological specimens (brain tissues and single cells). Using the matrix completion outcome with the supervised method allows for large compressions (64 × ) and bio-imaging speeds surpassing current technology in spontaneous Raman microspectroscopy. Therefore, our results open interesting perspectives for clinical and cell biology applications using the much faster compressive Raman framework.

Details

Language :
English
Database :
OpenAIRE
Journal :
Optica, Optica, 2019, 6, pp.341-346. ⟨10.1364/OPTICA.6.000341⟩, Repositori Universitat Jaume I, Universitat Jaume I
Accession number :
edsair.doi.dedup.....3afe8cde2e5ade9c729697dca24006e8