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Apollo: a community resource for genome annotation editing
- Publication Year :
- 2009
- Publisher :
- Oxford University Press, 2009.
-
Abstract
- Summary: Apollo is a genome annotation-editing tool with an easy to use graphical interface. It is a component of the GMOD project, with ongoing development driven by the community. Recent additions to the software include support for the generic feature format version 3 (GFF3), continuous transcriptome data, a full Chado database interface, integration with remote services for on-the-fly BLAST and Primer BLAST analyses, graphical interfaces for configuring user preferences and full undo of all edit operations. Apollo's user community continues to grow, including its use as an educational tool for college and high-school students. Availability: Apollo is a Java application distributed under a free and open source license. Installers for Windows, Linux, Unix, Solaris and Mac OS X are available at http://apollo.berkeleybop.org, and the source code is available from the SourceForge CVS repository at http://gmod.cvs.sourceforge.net/gmod/apollo. Contact: elee@berkeleybop.org
- Subjects :
- Statistics and Probability
Source code
Java
Computer science
media_common.quotation_subject
Apollo
Genomics
computer.software_genre
Undo
Biochemistry
Genome
World Wide Web
Transcriptome
User-Computer Interface
Software
Computer Graphics
Molecular Biology
media_common
computer.programming_language
Graphical user interface
Unix
Database
biology
business.industry
Genome project
biology.organism_classification
Computer Science Applications
Computational Mathematics
Applications Note
Computational Theory and Mathematics
OS X
Database Management Systems
Primer (molecular biology)
business
computer
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....3aee96f4727c25b7a0c6111750b9d4b5