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Translation Analysis at the Genome Scale by Ribosome Profiling
- Source :
- Yeast Functional Genomics, Yeast Functional Genomics, pp.105-124, 2016, 9781493930784. ⟨10.1007/978-1-4939-3079-1_7⟩, Methods in Molecular Biology ISBN: 9781493930784, Yeast Functional Genomics, pp.105-124, 2016, 9781493930784. 〈10.1007/978-1-4939-3079-1_7〉
- Publication Year :
- 2016
- Publisher :
- HAL CCSD, 2016.
-
Abstract
- International audience; Ribosome profiling is an emerging approach using deep sequencing of the mRNA part protected by the ribosome to study protein synthesis at the genome scale. This approach provides new insights into gene regulation at the translational level. In this review we describe the protocol to prepare polysomes and extract ribosome protected fragments before to deep sequence them.
- Subjects :
- 0301 basic medicine
MESH : Protein Biosynthesis
MESH : RNA, Messenger
[SDV]Life Sciences [q-bio]
5.8S ribosomal RNA
Computational biology
Biology
Ribosome profiling
Deep sequencing
03 medical and health sciences
Ribo-seq
Translational regulation
MESH: Genome
MESH: High-Throughput Nucleotide Sequencing
MESH: RNA, Messenger
MESH : Ribosomes
Genetics
[ SDV ] Life Sciences [q-bio]
Recoding
Shine-Dalgarno sequence
Translation (biology)
Ribosomal binding site
030104 developmental biology
Translation regulation
MESH: Protein Biosynthesis
MESH : Polyribosomes
MESH : Genome
Eukaryotic Ribosome
MESH: Polyribosomes
MESH: Ribosomes
MESH : High-Throughput Nucleotide Sequencing
Subjects
Details
- Language :
- English
- ISBN :
- 978-1-4939-3078-4
- ISBNs :
- 9781493930784
- Database :
- OpenAIRE
- Journal :
- Yeast Functional Genomics, Yeast Functional Genomics, pp.105-124, 2016, 9781493930784. ⟨10.1007/978-1-4939-3079-1_7⟩, Methods in Molecular Biology ISBN: 9781493930784, Yeast Functional Genomics, pp.105-124, 2016, 9781493930784. 〈10.1007/978-1-4939-3079-1_7〉
- Accession number :
- edsair.doi.dedup.....3a9bf2c257be70dd006ab9c6da3b4925
- Full Text :
- https://doi.org/10.1007/978-1-4939-3079-1_7⟩