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Coronapp : A web application to annotate and monitor SARS‐CoV‐2 mutations

Authors :
Daniele Mercatelli
Federico M. Giorgi
Luca Triboli
Forest Ray
Eleonora Fornasari
Mercatelli D.
Triboli L.
Fornasari E.
Ray F.
Giorgi F.M.
Source :
Journal of Medical Virology
Publication Year :
2020
Publisher :
Wiley, 2020.

Abstract

The avalanche of genomic data generated from the severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) virus requires the development of tools to detect and monitor its mutations across the world. Here, we present a webtool, coronapp, dedicated to easily processing user‐provided SARS‐CoV‐2 genomic sequences and visualizing the current worldwide status of SARS‐CoV‐2 mutations. The webtool allows users to highlight mutations and categorize them by frequency, country, genomic location and effect on protein sequences, and to monitor their presence in the population over time. The tool is available at http://giorgilab.unibo.it/coronannotator/ for the annotation of user‐provided sequences. The full code is freely shared at https://github.com/federicogiorgi/giorgilab/tree/master/coronannotator.

Details

Language :
English
ISSN :
10969071 and 01466615
Database :
OpenAIRE
Journal :
Journal of Medical Virology
Accession number :
edsair.doi.dedup.....3a74ab99b15f5b4a8ec6431767bb88ed
Full Text :
https://doi.org/10.1002/jmv.26678