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Bioactivity-explorer: a web application for interactive visualization and exploration of bioactivity data

Authors :
Tengfei Du
Yufei Zhao
Lu Liang
Xiaoyong Zhao
Mengmeng Liu
Zhonghua Wang
Jianping Lin
Chunfeng Ma
Source :
Journal of Cheminformatics, Vol 11, Iss 1, Pp 1-6 (2019), Journal of Cheminformatics
Publication Year :
2019
Publisher :
Springer Science and Business Media LLC, 2019.

Abstract

To better leverage the accumulated bioactivity data in the ChEMBL database, we have developed Bioactivity-explorer, a web application for interactive visualization and exploration of the large-scale bioactivity data in ChEMBL. Mining and integration of the Therapeutic Target Database disease-target mapping into the ChEMBL database has enabled Bioactivity-explorer to include 493,430 scaffolds, 31,400,000 matched molecular pairs, 1330,220 target–target interactions in terms of shared active compounds, 4526,718 target–target interactions in terms of shared active scaffolds, 97,041,700 molecule–molecule interactions and 14,974 disease-target mappings. This web tool is available at http://cadd.pharmacy.nankai.edu.cn/b17r. The source codes of the front end and back end, released under MIT license, can be found at GitHub. Electronic supplementary material The online version of this article (10.1186/s13321-019-0370-7) contains supplementary material, which is available to authorized users.

Details

ISSN :
17582946
Volume :
11
Database :
OpenAIRE
Journal :
Journal of Cheminformatics
Accession number :
edsair.doi.dedup.....38b84515216115975736d5175fc0db86