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Author Correction: Improving pharmacogenetic prediction of extrapyramidal symptoms induced by antipsychotics

Authors :
Sergi Mas
Natalia Rodríguez
Jerónimo Saiz-Ruiz
M.J. Cuesta
M. Parellada
Amalia Lafuente
Daniel Boloc
Anna Gortat
Miquel Bernardo
Susana García-Cerro
Patricia Gassó
Jia Qi Cheng-Zhang
Source :
Translational Psychiatry
Publication Year :
2019
Publisher :
Springer Science and Business Media LLC, 2019.

Abstract

In previous work we developed a pharmacogenetic predictor of antipsychotic (AP) induced extrapyramidal symptoms (EPS) based on four genes involved in mTOR regulation. The main objective is to improve this predictor by increasing its biological plausibility and replication. We re-sequence the four genes using next-generation sequencing. We predict functionality "in silico" of all identified SNPs and test it using gene reporter assays. Using functional SNPs, we develop a new predictor utilizing machine learning algorithms (Discovery Cohort, N = 131) and replicate it in two independent cohorts (Replication Cohort 1, N = 113; Replication Cohort 2, N = 113). After prioritization, four SNPs were used to develop the pharmacogenetic predictor of AP-induced EPS. The model constructed using the Naive Bayes algorithm achieved a 66% of accuracy in the Discovery Cohort, and similar performances in the replication cohorts. The result is an improved pharmacogenetic predictor of AP-induced EPS, which is more robust and generalizable than the original.

Details

ISSN :
21583188
Volume :
9
Database :
OpenAIRE
Journal :
Translational Psychiatry
Accession number :
edsair.doi.dedup.....389770b33c5c217ee78b03b3d2443a80
Full Text :
https://doi.org/10.1038/s41398-019-0480-z