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Transition path sampling for non-equilibrium dynamics without predefined reaction coordinates
- Source :
- Journal of Chemical Physics, 152(4):044108. American Institute of Physics
- Publication Year :
- 2020
-
Abstract
- We develop two novel transition path sampling (TPS) algorithms for harvesting ensembles of rare event trajectories using non-equilibrium dynamics. These methods have the advantage that no predefined reaction coordinate is needed. Instead, an instantaneous reaction coordinate is based on the current path. Constituting a Monte Carlo random walk in trajectory space, the algorithms can be viewed as bridging between the original TPS methodology and the Rosenbluth based forward flux sampling methodology. We illustrate the new methods on toy models undergoing equilibrium and non-equilibrium dynamics, including an active Brownian particle system. For the latter, we find that transitions between steady states occur via states that are locally ordered but globally disordered.
- Subjects :
- Particle system
010304 chemical physics
Computer science
Monte Carlo method
General Physics and Astronomy
010402 general chemistry
Random walk
01 natural sciences
0104 chemical sciences
Reaction coordinate
0103 physical sciences
Statistical physics
Physical and Theoretical Chemistry
Transition path sampling
Sampling methodology
Brownian motion
Subjects
Details
- Language :
- English
- ISSN :
- 00219606
- Volume :
- 152
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- Journal of Chemical Physics
- Accession number :
- edsair.doi.dedup.....380ecda188d33ca787a5b8f905a3423e