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Injection of Automatically Selected DBpedia Subjects in Electronic Medical Records to boost Hospitalization Prediction

Authors :
Virginie Lacroix-Hugues
David Darmon
Catherine Faron-Zucker
Raphaël Gazzotti
Fabien Gandon
Web-Instrumented Man-Machine Interactions, Communities and Semantics (WIMMICS)
Inria Sophia Antipolis - Méditerranée (CRISAM)
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Scalable and Pervasive softwARe and Knowledge Systems (Laboratoire I3S - SPARKS)
Laboratoire d'Informatique, Signaux, et Systèmes de Sophia Antipolis (I3S)
Université Nice Sophia Antipolis (... - 2019) (UNS)
COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Université Nice Sophia Antipolis (... - 2019) (UNS)
COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Laboratoire d'Informatique, Signaux, et Systèmes de Sophia Antipolis (I3S)
COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)
SynchroNext
Université Nice Sophia Antipolis - Faculté de Médecine (UNS UFR Médecine)
COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)
Département d'Enseignement et de Recherche en Médecine Générale (DERGM)
COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Nice Sophia Antipolis (... - 2019) (UNS)
ANR-15-IDEX-0001,UCA JEDI,Idex UCA JEDI(2015)
ANR-19-P3IA-0002,3IA@cote d'azur,3IA Côte d'Azur(2019)
Université Nice Sophia Antipolis (1965 - 2019) (UNS)
COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Centre National de la Recherche Scientifique (CNRS)-Université Côte d'Azur (UCA)-Université Nice Sophia Antipolis (1965 - 2019) (UNS)
COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Nice Sophia Antipolis (1965 - 2019) (UNS)
Source :
SAC 2020-35th ACM/SIGAPP Symposium On Applied Computing, SAC 2020-35th ACM/SIGAPP Symposium On Applied Computing, Mar 2020, Brno, Czech Republic. ⟨10.1145/3341105.3373932⟩, SAC
Publication Year :
2020
Publisher :
HAL CCSD, 2020.

Abstract

International audience; Although there are many medical standard vocabularies available, it remains challenging to properly identify domain concepts in electronic medical records. Variations in the annotations of these texts in terms of coverage and abstraction may be due to the chosen annotation methods and the knowledge graphs, and may lead to very different performances in the automated processing of these annotations. We propose a semi-supervised approach based on DBpedia to extract medical subjects from EMRs and evaluate the impact of augmenting the features used to represent EMRs with these subjects in the task of predicting hospitalization. We compare the impact of subjects selected by experts vs. by machine learning methods through feature selection. Our approach was experimented on data from the database PRIMEGE PACA that contains more than 600,000 consultations carried out by 17 general practitioners (GPs).

Details

Language :
English
Database :
OpenAIRE
Journal :
SAC 2020-35th ACM/SIGAPP Symposium On Applied Computing, SAC 2020-35th ACM/SIGAPP Symposium On Applied Computing, Mar 2020, Brno, Czech Republic. ⟨10.1145/3341105.3373932⟩, SAC
Accession number :
edsair.doi.dedup.....3760d7680d8c30855b837ad19d1861f8
Full Text :
https://doi.org/10.1145/3341105.3373932⟩