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Possibility and Challenges of Conversion of Current Virus Species Names to Linnaean Binomials

Authors :
Sbina Bavari
Susan Payne
Alexander Bukreyev
Arvind Varsani
Víctor Romanowski
Kartik Chandran
Ralf G. Dietzgen
Mark D. Stenglein
Anna N. Clawson
Sead Sabanadzovic
Gael Kurath
Andrea Maisner
Peter J. Walker
Ralf Dürrwald
Juan Carlos de la Torre
Eric M. Leroy
Mária Benko
Keizo Tomonaga
Gary P. Kobinger
Robert A. Lamb
Hideki Kondo
F. Murilo Zerbini
Martin Schwemmle
Robert B. Tesh
Gaya K. Amarasinghe
Andrew J. Easton
Michael J. Buchmeier
Jean-Paul Gonzalez
Anna E. Whitfield
Nikos Vasilakis
Jonathan S. Towner
Pierre Formenty
Jens H. Kuhn
Norbert Nowotny
Roger Hewson
Ayato Takada
Mart Krupovic
Igor S. Lukashevich
David M. Stone
Clarence J. Peters
Sheli R. Radoshitzky
Bertus K. Rima
Janusz T. Paweska
Masayuki Horie
Christopher S. Clegg
Victoria Wahl-Jensen
Christopher F. Basler
Sébastian Emonet
Charles H. Calisher
Lin-Fa Wang
Rémi N. Charrel
Jean L. Patterson
Elodie Ghedin
Dennis Rubbenstroth
Dàohóng Jiāng
Sergey V. Netesov
Hélène Sanfaçon
Thomas S. Postler
Ron A. M. Fouchier
Peter L. Collins
Noël Tordo
Maria S. Salvato
John M. Dye
Arcady Mushegian
Sophie J. Smither
Joseph L. DeRisi
Olga Dolnik
Kim R. Blasdell
Balázs Harrach
Viktor E. Volchkov
Thomas Briese
Andrew M. Kropinski
Columbia University College of Physicians and Surgeons
Integrated Research Facility at Fort Detrick, National Institute of Allergy and Infectious Diseases
National Institutes of Health
Washington University School of Medicine (WUSM)
University of Washington [Seattle]
Georgia State University
University System of Georgia (USG)
Army Medical Research Institute of Infectious Diseases [USA] (USAMRIID)
Institute for Soil Sciences and Agricultural Chemistry (ATK TAKI)
Centre for Agricultural Research [Budapest] (ATK)
Hungarian Academy of Sciences (MTA)-Hungarian Academy of Sciences (MTA)
Commonwealth Scientific and Industrial Research Organisation [Canberra] (CSIRO)
Columbia Mailman School of Public Health
University of California [Irvine] (UCI)
University of California
The University of Texas Medical Branch (UTMB)
College of Veterinary Medicine and Biomedical Sciences
Colorado State University [Fort Collins] (CSU)
Albert Einstein College of Medicine [New York]
Emergence des Pathologies Virales (EPV)
Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)
Institut Hospitalier Universitaire Méditerranée Infection (IHU Marseille)
Les Mandinaux
National Institute of Allergy and Infectious Diseases [Bethesda] (NIAID-NIH)
National Institutes of Health [Bethesda] (NIH)
Department of Immunology and Microbial Science
Scripps Research Institute
Department of Medicine [San Francisco]
University of California [San Francisco] (UCSF)
University of California-University of California
Queensland Alliance for Agriculture and Food Innovation (QAAFI)
University of Queensland [Brisbane]
Philipps University of Marburg
IDT Biologika
School of Life Sciences
Warwick University
Unité de Virologie
Institut de Recherche Biomédicale des Armées (IRBA)
Organisation Mondiale de la Santé / World Health Organization Office (OMS / WHO)
Department of Viroscience [Rotterdam, The Netherlands]
Erasmus University Medical Center [Rotterdam] (Erasmus MC)
Center for Genomics and Systems Biology
Department of Biology [New York]
New York University [New York] (NYU)
NYU System (NYU)-NYU System (NYU)-New York University [New York] (NYU)
NYU System (NYU)-NYU System (NYU)
Health for Development
Public Health England [Salisbury] (PHE)
Kagoshima University
State Key Laboratory of Agricultural Microbiology
Huazhong Agricultural University
Research Centre in Infectious Diseases, CHUL Research Centre and Department of Microbiology and Immunology
Université Laval [Québec] (ULaval)-Faculty of Medicine
Institute of Plant Science and Resources
Okayama University
University of Guelph
Biologie Moléculaire du Gène chez les Extrêmophiles (BMGE)
Institut Pasteur [Paris]
US Geological Survey [Seattle]
United States Geological Survey [Reston] (USGS)
Northwestern University [Evanston]
Centre International de Recherches Médicales de Franceville (CIRMF)
Department of Pharmacology and Toxicology
University of Louisville
Department of Molecular Biosciences, Institute for Cellular and Molecular Biology, Center for Infectious Disease
University of Texas at Austin [Austin]
Novosibirsk State University (NSU)
University of Veterinary Medicine [Vienna] (Vetmeduni)
Mohammed Bin Rashid University of Medicine and Health Sciences (MBRU)
Texas Biomedical Research Institute [San Antonio, TX]
Texas A&M University System
National Institute for Communicable Diseases [Johannesburg] (NICD)
Queen's University [Belfast] (QUB)
Instituto de Biotecnología y Biología Molecular [La Plata] (IBBM)
Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires] (CONICET)-Facultad de Ciencias Exactas [La Plata]
Universidad Nacional de la Plata [Argentine] (UNLP)-Universidad Nacional de la Plata [Argentine] (UNLP)
University of Freiburg [Freiburg]
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology [Mstate, USA] (BCH-EPP)
Mississippi State University [Mississippi]
Summerland Research and Development Centre
Agriculture and Agri-Food [Ottawa] (AAFC)
University of Maryland School of Medicine
University of Maryland System
Defence Science and Technology Laboratory (Dstl)
Ministry of Defence (UK) (MOD)
Department of Microbiology, Immunology and Pathology
Centre for Environment, Fisheries and Aquaculture Science [Weymouth] (CEFAS)
Hokkaido University [Sapporo, Japan]
Institute for Virus Research
Kyoto University [Kyoto]
Stratégies antivirales
Institut Pasteur de Guinée
Réseau International des Instituts Pasteur (RIIP)
Viral Special Pathogens Branch
Centers for Disease Control and Prevention-WHO Collaborative Centre for Viral Hemorrhagic Fevers
Bases moléculaires de la pathogénicité virale – Molecular Basis of Viral Pathogenicity (BMPV)
Centre International de Recherche en Infectiologie - UMR (CIRI)
École normale supérieure - Lyon (ENS Lyon)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure - Lyon (ENS Lyon)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
National Biodefense Analysis and Countermeasures Center [Frederick]
U.S. Social Security Administration
CSIRO Health & Biosecurity
Department of Agriculture, Fisheries and Forestry
Ecoscience Precinct, GPO Box 267, Brisbane
Duke-NUS Medical School [Singapore]
Center for Fundamental and Applied Microbiomics
Arizona State University [Tempe] (ASU)-Biodesign Institute
Kansas State University
Departamento de Fitopatologia [Viçosa, Brazil] (BIOAGRO)
Universidade Federal de Vicosa (UFV)
This work was supported in part through Battelle Memorial Institute’s prime contract with the US National Institute of Allergy and Infectious Diseases (NIAID) under Contract No. HHSN272200700016I. A subcontractor to Battelle Memorial Institute who performed this work is J.H.K., an employee of Tunnell Government Services, Inc. This work was also funded in part under National Institutes of Health (NIH) contract HHSN272201000040I/HHSN27200004/D04 and R24AI120942 (N.V., R.B.T.), and the National Science Foundation (NSF) Individual Research and Development (IR/D) program (A.R.M.).
We thank Laura Bollinger (NIH/NIAID Integrated Research Facility at Fort Detrick, Frederick, MD, USA) for critically editing the manuscript, Andrew J. Davison (MRC – University of Glasgow Centre for Virus Research, Glasgow, UK) and Michael J. Adams (Department of Plant Pathology and Microbiology, Rothamsted Research, Harpenden, Herts, UK) of the ICTV Executive Committee for suggestions on manuscript improvement, and Arya Ariël Kuhn for sustained vocal support and (dia)critical remarks
Albert Einstein College of Medicine
Institut Hospitalier Universitaire Méditerranée Infection (IHU AMU)
Queensland Alliance for Agriculture and Food Innovation
University of Queensland (UQ)
Public Health England [Porton Down, Salisbury]
Faculty of Medicine-Laval University [Québec]
Okayama University [Okayama]
Centre International de Recherches Médicales de Franceville
Texas Biomedical Research Institute [San Antonio, Texas]
A&M University
National Institute for Communicable Diseases (NICD)
Centre for Experimental Medicine [Queen’s University of Belfast]
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology
Hokkaido University
Bases moléculaires de la pathogénicité virale – Molecular Basis of Viral Pathogenicity
Institut National de la Santé et de la Recherche Médicale (INSERM)-École normale supérieure - Lyon (ENS Lyon)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)-Institut National de la Santé et de la Recherche Médicale (INSERM)-École normale supérieure - Lyon (ENS Lyon)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)
Duke NUS Medical School
Departamento de Fitopatologia/BIOAGRO
Virology
U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID)
Columbia University [New York]
University of California [Irvine] (UC Irvine)
University of California (UC)
Institut de Recherche pour le Développement (IRD)-Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Institut National de la Santé et de la Recherche Médicale (INSERM)
The Scripps Research Institute [La Jolla, San Diego]
University of California [San Francisco] (UC San Francisco)
University of California (UC)-University of California (UC)
Philipps Universität Marburg = Philipps University of Marburg
University of Warwick [Coventry]
Institut de Recherche Biomédicale des Armées [Brétigny-sur-Orge] (IRBA)
Huazhong Agricultural University [Wuhan] (HZAU)
Institut Pasteur [Paris] (IP)
Agriculture and Agri-Food (AAFC)
Kyoto University
Centre International de Recherche en Infectiologie (CIRI)
École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-École normale supérieure de Lyon (ENS de Lyon)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
Universidade Federal de Viçosa = Federal University of Viçosa (UFV)
Source :
BASE-Bielefeld Academic Search Engine, SEDICI (UNLP), Universidad Nacional de La Plata, instacron:UNLP, Systematic Biology, Systematic Biology, Oxford University Press (OUP), 2017, 66 (3), pp.463-473. ⟨10.1093/sysbio/syw096⟩, Victor Romanowski, Systematic Biology, 66(3), 463-473. Oxford University Press, LOCUS Repositório Institucional da UFV, Universidade Federal de Viçosa (UFV), instacron:UFV, Systematic Biology, 2017, 66 (3), pp.463-473. ⟨10.1093/sysbio/syw096⟩, Systematic biology, vol 66, iss 3

Abstract

Botanical, mycological, zoological, and prokaryotic species names follow the Linnaean format, consisting of an italicized Latinized binomen with a capitalized genus name and a lower case species epithet (e.g., Homo sapiens). Virus species names, however, do not follow a uniform format, and, even when binomial, are not Linnaean in style. In this thought exercise, we attempted toconvert all currently official names ofspecies included in the viru sfamily Arenaviridae and the virus order Mononegavirales to Linnaean binomials, and to identify and address associated challenges and concerns. Surprisingly, this endeavor was not as complicated or time-consuming as even the authors of this article expected when conceiving the experiment.<br />La lista completa de autores que integran el documento puede consultarse en el archivo<br />Instituto de Biotecnologia y Biologia Molecular

Details

ISSN :
10635157 and 1076836X
Database :
OpenAIRE
Journal :
BASE-Bielefeld Academic Search Engine, SEDICI (UNLP), Universidad Nacional de La Plata, instacron:UNLP, Systematic Biology, Systematic Biology, Oxford University Press (OUP), 2017, 66 (3), pp.463-473. ⟨10.1093/sysbio/syw096⟩, Victor Romanowski, Systematic Biology, 66(3), 463-473. Oxford University Press, LOCUS Repositório Institucional da UFV, Universidade Federal de Viçosa (UFV), instacron:UFV, Systematic Biology, 2017, 66 (3), pp.463-473. ⟨10.1093/sysbio/syw096⟩, Systematic biology, vol 66, iss 3
Accession number :
edsair.doi.dedup.....36db02dc87c6e8b537c0f26633c87828