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Interoperability with Moby 1.0--it's better than sharing your toothbrush!

Authors :
Sergio Ramírez
Mark Wilkinson
E. D. Saiz
A. Ng
William L. Crosby
Dennis Wang
Joaquín Dopazo
Richard Bruskiewich
Lincoln Stein
L. Zamacola
Christoph Wilhelm Sensen
M. G. Claros
Martin Senger
Rebecca Ernst
N. Opushneva
Benjamin M. Good
Jack A. M. Leunissen
Jaime Huerta-Cepas
Josep Lluís Gelpí
Matthew G. Links
José M. Fernández
Romina Royo
Dirk Haase
Céline Noirot
Björn Usadel
Modesto Orozco
Pieter B T Neerincx
Y. Wong
M. M. Rojano
Heiko Schoof
A. Valencia
F. Gibbons
Oswaldo Trelles
Johan Karlsson
A. Kerhornou
M. Ng
Simon N. Twigger
R. F. S. Cruz
Gary Schiltz
Paul M. K. Gordon
Roderic Guigó
P. Bardou
Damian D. G. Gessler
I. Navas
Alba Navarro
I. Parraga
J. M. R. Carrasco
Jérôme Gouzy
José F. Aldana
R. Rosset
A. Groscurth
N. Jimenez
L. Shen
Edward A. Kawas
J. Tarraga
Andrew Farmer
A. J. Pérez
David G. Pisano
José María Carazo
Laboratoire de Génétique Cellulaire (LGC)
Institut National de la Recherche Agronomique (INRA)-Ecole Nationale Vétérinaire de Toulouse (ENVT)
Institut National Polytechnique (Toulouse) (Toulouse INP)
Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Institut National Polytechnique (Toulouse) (Toulouse INP)
Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées
Source :
Briefings in Bioinformatics, Briefings in Bioinformatics, Oxford University Press (OUP), 2008, 9, pp.220-231, HAL, Briefings in Bioinformatics, 9(3), 220-231, Briefings in Bioinformatics 9 (2008) 3
Publication Year :
2008
Publisher :
HAL CCSD, 2008.

Abstract

The BioMoby project was initiated in 2001 from within the model organism database community. It aimed to standardize methodologies to facilitate information exchange and access to analytical resources, using a consensus driven approach. Six years later, the BioMoby development community is pleased to announce the release of the 1.0 version of the interoperability framework, registry Application Programming Interface and supporting Perl and Java code-bases. Together, these provide interoperable access to over 1400 bioinformatics resources worldwide through the BioMoby platform, and this number continues to grow. Here we highlight and discuss the features of BioMoby that make it distinct from other Semantic Web Service and interoperability initiatives, and that have been instrumental to its deployment and use by a wide community of bioinformatics service providers. The standard, client software, and supporting code libraries are all freely available at http://www.biomoby.org/.

Details

Language :
English
ISSN :
14675463 and 14774054
Database :
OpenAIRE
Journal :
Briefings in Bioinformatics, Briefings in Bioinformatics, Oxford University Press (OUP), 2008, 9, pp.220-231, HAL, Briefings in Bioinformatics, 9(3), 220-231, Briefings in Bioinformatics 9 (2008) 3
Accession number :
edsair.doi.dedup.....3641f3420e635936e09cde4df7f4ed0f