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Starmerella reginensis f.a., sp. nov. and Starmerella kourouensis f.a., sp. nov., isolated from flowers in French Guiana
- Source :
- International Journal of Systematic and Evolutionary Microbiology, International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2018, 68 (7), pp.2299-2305. ⟨10.1099/ijsem.0.002829⟩
- Publication Year :
- 2018
- Publisher :
- Microbiology Society, 2018.
-
Abstract
- International audience; Analysis of yeasts isolated from various biotopes in French Guiana led to the identification of two strains isolated from flowers and designated CLIB 1634(T) and CLIB 1707(T). Comparison of the D1/D2 domain of the large subunit (LSU D1/D2) rRNA gene sequences of CLIB 1634(T) and CLIB 1707(T) to those in the GenBank database revealed that these strains belong to the Starmerella Glade. Strain CLIB 1634(T) was shown to diverge from the closely related Starmerella apicola type strain CBS 2868 T with a sequence divergence of 1.34 and 1.30 %, in the LSU D1/D2 rRNA gene and internal transcribed spacer (ITS) sequences respectively. Strain CLIB 1634(T) and Candida apicola CBS 2868(T) diverged by 3.81 and 14.96 % at the level of the protein-coding gene partial sequences EF-1 alpha and RPB2, respectively. CLIB 1707(T) was found to have sequence divergence of 3.88 and 9.16 % in the LSU D1/D2 rRNA gene and ITS, respectively, from that of the most closely related species Starmerella ratchasimensis type strain CBS 10611(T). The species Starmerella reginensis f.a., sp. nov. and Starmerella kourouensis f.a., sp. nov. are proposed to accommodate strains CLIB 1634(T) (=CBS 15247(T)) and CLIB 1707(T) (=CBS 15257(T)), respectively.
- Subjects :
- 0301 basic medicine
[SDV]Life Sciences [q-bio]
Genes, Fungal
Starmerella
Flowers
yeast
Microbiology
03 medical and health sciences
Peptide Elongation Factor 1
DNA, Ribosomal Spacer
Internal transcribed spacer
DNA, Fungal
Mycological Typing Techniques
Clade
Gene
Phylogeny
Ecology, Evolution, Behavior and Systematics
Genetics
biology
[Candida] apicola
Strain (biology)
Sequence Analysis, DNA
General Medicine
Ribosomal RNA
biology.organism_classification
Sarmerella
flower
French Guiana
Sacharomycotina
030104 developmental biology
GenBank
Saccharomycetales
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 68
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....35420331e2fab06e03a23106cd6c9019
- Full Text :
- https://doi.org/10.1099/ijsem.0.002829