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Use of the Phoenix automated system for identification of Streptococcus and Enterococcus spp
- Source :
- Journal of clinical microbiology. 44(9)
- Publication Year :
- 2006
-
Abstract
- The Phoenix system (Becton Dickinson Diagnostic Systems, Sparks, MD) was evaluated for identification (ID) to the species level of streptococci and enterococci. Two hundred clinical isolates were investigated: beta-hemolytic streptococci ( n = 50), Streptococcus pneumoniae organisms ( n = 46), viridans group streptococci ( n = 31), Enterococcus faecium ( n = 36), Enterococcus faecalis ( n = 25), and other catalase-negative cocci ( n = 12). The API system (bioMérieux, Marcy l'Étoile, France) was used as a comparator. Molecular methods (sequencing of 16S rRNA and zwf and gki genes and ddl gene amplification) were used to investigate discordant results. Upon resolution of discrepancies, correct species ID was achieved by the Phoenix system for 121/129 (93.8%) streptococci and 63/70 (90.0%) enterococci. Excellent results were obtained for S. pneumoniae (45/45) and beta-hemolytic streptococci (49/50). With regard to viridans streptococci, the accuracy of the Phoenix system was 83.9%. Among the latter organisms, the best performance was obtained with isolates of the Streptococcus sanguinis group and Streptococcus anginosus group; problems were instead encountered with the Streptococcus mitis group. Four E. faecium and three E. faecalis isolates were misidentified as Enterococcus casseliflavus/Enterococcus gallinarum or Enterococcus durans . Thus, these isolates were identified only at the genus level. Compared with commercially available systems, the Phoenix system appears a reliable diagnostic tool for identifying clinically relevant streptococci and enterococci. The SMIC/ID-2 panel proved particularly effective for beta-hemolytic streptococci and pneumococci.
- Subjects :
- Microbiology (medical)
Sensitivity and Specificity
Enterococcus faecalis
Microbiology
Automation
Enterococcus gallinarum
Bacterial Proteins
Species Specificity
RNA, Ribosomal, 16S
Humans
biology
Clinical Laboratory Techniques
Becton dickinson
Streptococcus
Bacteriology
Sequence Analysis, DNA
biochemical phenomena, metabolism, and nutrition
biology.organism_classification
Enterococcus durans
Bacterial Typing Techniques
Streptococcus sanguinis
Enterococcus
Viridans streptococci
Reagent Kits, Diagnostic
Enterococcus faecium
Subjects
Details
- ISSN :
- 00951137
- Volume :
- 44
- Issue :
- 9
- Database :
- OpenAIRE
- Journal :
- Journal of clinical microbiology
- Accession number :
- edsair.doi.dedup.....3270a6a497ae8081cc6f64e21509636f