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Effects of ADAMTS14 genetic polymorphism and cigarette smoking on the clinicopathologic development of hepatocellular carcinoma
- Source :
- PLoS ONE, Vol 12, Iss 2, p e0172506 (2017), PLoS ONE
- Publication Year :
- 2017
- Publisher :
- Public Library of Science (PLoS), 2017.
-
Abstract
- Background ADAMTS14 is a member of the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs), which are proteolytic enzymes with a variety of further ancillary domain in the C-terminal region for substrate specificity and enzyme localization via extracellular matrix association. However, whether ADAMTS14 genetic variants play a role in hepatocellular carcinoma (HCC) susceptibility remains unknown. Methodology/principal findings Four non-synonymous single-nucleotide polymorphisms (nsSNPs) of the ADAMTS14 gene were examined from 680 controls and 340 patients with HCC. Among 141 HCC patients with smoking behaviour, we found significant associations of the rs12774070 (CC+AA vs CC) and rs61573157 (CT+TT vs CC) variants with a clinical stage of HCC (OR: 2.500 and 2.767; 95% CI: 1.148-5.446 and 1.096-6.483; P = 0.019 and 0.026, respectively) and tumour size (OR: 2.387 and 2.659; 95% CI: 1.098-5.188 and 1.055-6.704; P = 0.026 and 0.034, respectively), but not with lymph node metastasis or other clinical statuses. Moreover, an additional integrated in silico analysis proposed that rs12774070 and rs61573157 affected essential post-translation O-glycosylation site within the 3rd thrombospondin type 1 repeat and a novel proline-rich region embedded within the C-terminal extension, respectively. Conclusions Taken together, our results suggest an involvement of ADAMTS14 SNP rs12774070 and rs61573157 in the liver tumorigenesis and implicate the ADAMTS14 gene polymorphism as a predict factor during the progression of HCC.
- Subjects :
- Male
Models, Molecular
Protein Structure Comparison
0301 basic medicine
lcsh:Medicine
Biochemistry
Metastasis
Database and Informatics Methods
Habits
ADAMTS Proteins
0302 clinical medicine
Basic Cancer Research
Medicine and Health Sciences
Smoking Habits
Macromolecular Structure Analysis
lcsh:Science
Metalloproteinase
Multidisciplinary
Liver Diseases
ADAMTS
Liver Neoplasms
Smoking
Proteolytic enzymes
Proteases
Middle Aged
Enzymes
Liver
Oncology
030220 oncology & carcinogenesis
Hepatocellular carcinoma
Female
Sequence Analysis
Research Article
Protein Structure
Carcinoma, Hepatocellular
Bioinformatics
Gastroenterology and Hepatology
Research and Analysis Methods
Polymorphism, Single Nucleotide
Carcinomas
03 medical and health sciences
Protein Domains
Gastrointestinal Tumors
Genetics
medicine
Carcinoma
Humans
SNP
Genetic Predisposition to Disease
Molecular Biology
Aged
Behavior
Thrombospondin
business.industry
lcsh:R
Cancers and Neoplasms
Biology and Life Sciences
Proteins
Human Genetics
Hepatocellular Carcinoma
medicine.disease
030104 developmental biology
Enzymology
Cancer research
lcsh:Q
Gene polymorphism
business
Sequence Alignment
Subjects
Details
- Language :
- English
- ISSN :
- 19326203
- Volume :
- 12
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- PLoS ONE
- Accession number :
- edsair.doi.dedup.....322ad0fa0ee93fdd1810cb78593ed8d4