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A family-based association study after genome-wide linkage analysis identified two genetic loci for renal function in a Mongolian population
- Source :
- Kidney International. 83(2):285-292
- Publication Year :
- 2013
- Publisher :
- Elsevier BV, 2013.
-
Abstract
- The estimated glomerular filtration rate is a well-known measure of renal function and is widely used to follow the course of disease. Although there have been several investigations establishing the genetic background contributing to renal function, Asian populations have rarely been used in these genome-wide studies. Here, we aimed to find candidate genetic determinants of renal function in 1007 individuals from 73 extended families of Mongolian origin. Linkage analysis found two suggestive regions near 9q21 (logarithm of odds (LOD) 2.82) and 15q15 (LOD 2.70). The subsequent family-based association study found 2 and 10 significant single-nucleotide polymorphisms (SNPs) in each region, respectively. The strongest SNPs on chromosome 9 and 15 were rs17400257 and rs1153831 with P -values of 7.21 × 10 -9 and 2.47 × 10 -11 , respectively. Genes located near these SNPs are considered candidates for determining renal function and include FRMD3 , GATM , and SPATA5L1 . Thus, we identified possible loci that determine renal function in an isolated Asian population. Consistent with previous reports, our study found genes linked and associated with renal function in other populations.
- Subjects :
- Adult
Male
Linkage disequilibrium
Genetic Linkage
Population
Renal function
isolated Mongolian population
Chromosome 9
Genome-wide association study
Single-nucleotide polymorphism
Biology
Polymorphism, Single Nucleotide
Linkage Disequilibrium
family-based association test
Asian People
Genetic linkage
Polymorphism (computer science)
Humans
education
Genetics
education.field_of_study
Tumor Suppressor Proteins
renal function
genome-wide linkage study
Middle Aged
Genetic Loci
Nephrology
Female
Genome-Wide Association Study
Glomerular Filtration Rate
Subjects
Details
- ISSN :
- 00852538
- Volume :
- 83
- Issue :
- 2
- Database :
- OpenAIRE
- Journal :
- Kidney International
- Accession number :
- edsair.doi.dedup.....3076cb1fd2bb10448460d2915259309a
- Full Text :
- https://doi.org/10.1038/ki.2012.389